Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 323 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Variovorax sp. SCN45

 Score =  139 bits (350), Expect = 1e-37
 Identities = 107/329 (32%), Positives = 156/329 (47%), Gaps = 45/329 (13%)

Query: 6   IALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWRYQGEPCQFPGAVDRS 65
           +A++FGG S+E  ++L S   +  AL + G   H                          
Sbjct: 12  VAVLFGGSSAEREISLMSGTGVLEALRSRGVDAH-------------------------- 45

Query: 66  APLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGLPCVGSGV 125
               +  P  R L+   +E      G    F ALHGR GEDGT+QG   + G+P  GSGV
Sbjct: 46  ----AFDPSQRELADLKRE------GFARCFVALHGRHGEDGTVQGALELLGIPYTGSGV 95

Query: 126 LGSAMAMDKDVTKRMVQSAGLVVVPWLAMNSMRPWEELV----ECLGSSTLFVKPATSGS 181
           + S++AMDK +TKR+ Q+ GL    ++ +   +   E +    + LG   L VKP   GS
Sbjct: 96  MASSVAMDKVMTKRIWQADGLPTPKYVRLAFDQQSREQIMAVPDVLG-LPLIVKPPREGS 154

Query: 182 SIGVSRVSNALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEGLMASVVGEIIKK 241
           SIGV++V    +   A  ++A+ D  VL E  + G E+ C VL       A  V  I   
Sbjct: 155 SIGVTKVEGYSQMQDAITLSAKYDADVLCEEFIEGEEVTCAVLGHGLDARALPVVRIAAP 214

Query: 242 EGHAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYARVDFFL-TE 300
           EG   YDYQ KY ++ V   + PS LP      IQ +++ A+R L  +G+ R D  +   
Sbjct: 215 EG--AYDYQNKYFTDDVK-YQCPSGLPDAEEHEIQRIALAAYRTLGCRGWGRADVMIRAS 271

Query: 301 EGEIILNEINTLPGFTSASMYPKMFECSG 329
           + +  L E+NT PG TS S+ P     +G
Sbjct: 272 DRKPFLLEMNTSPGMTSHSLVPMSARAAG 300