Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 319 a.a., D-alanine--D-alanine ligase from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  141 bits (356), Expect = 2e-38
 Identities = 113/344 (32%), Positives = 167/344 (48%), Gaps = 62/344 (18%)

Query: 6   IALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWRYQGEPCQFPGAVDRS 65
           +A++FGG+S+E +V+L S   +  AL+  G  V   GID                     
Sbjct: 21  VAVLFGGKSAERAVSLNSGNAVLGALLEAG--VDAFGID--------------------- 57

Query: 66  APLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGLPCVGSGV 125
                   G   L     E       ID  F  LHGR GEDGT+QGL     +P  GSGV
Sbjct: 58  -------VGDDFLQRLVSEK------IDRAFIVLHGRGGEDGTMQGLLECLEIPYTGSGV 104

Query: 126 LGSAMAMDKDVTKRMVQSAGLVVVPWLAMNSMRPWEELVECLGSST-----LFVKPATSG 180
           L SA+AMDK  TK++ QS GL       +      E   +C+ ++T     L VKPA  G
Sbjct: 105 LASALAMDKLRTKQVWQSLGLATPAHAVL------ENESDCICAATELGLPLIVKPAHEG 158

Query: 181 SSIGVSRVSNALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEGLMASVVGEIIK 240
           SSIG+++V++  E  AA+  A+  D++VLVE  + G E            +AS+ G+++ 
Sbjct: 159 SSIGMAKVNSVDELIAAWKAASTYDSQVLVEQWIQGPEF----------TVASLRGQVLP 208

Query: 241 KEG----HAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYARVDF 296
             G    H++YDY AKY + S T  R+P  L       ++ L+ +A   + + G+AR D 
Sbjct: 209 PIGLGTPHSFYDYDAKYLA-SDTQYRIPCGLGDAQEQELKQLAARACDAIGIAGWARTDV 267

Query: 297 FLTEEGEIILNEINTLPGFTSASMYPKMFECSGYPPPKLVGALV 340
               +G+  L E+NT+PG T  S+ P     +G    +LV A++
Sbjct: 268 MQDAQGKFWLLEVNTVPGMTDHSLVPMAARAAGLDFQQLVLAIL 311