Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 304 a.a., putative D-alanine--D-alanine ligase from Pseudomonas putida KT2440

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 96/337 (28%), Positives = 146/337 (43%), Gaps = 55/337 (16%)

Query: 6   IALVFGGRSSEHSVALRSAATIHAALMAL--GHRVHCVGIDREGNWRYQGEPCQFPGAVD 63
           IA++ GG SSE  V+L+++  +  +L  L   H +  +   RE                 
Sbjct: 5   IAIITGGNSSEREVSLQTSEAVSQSLKTLQISHEILTISDYRE----------------- 47

Query: 64  RSAPLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGLPCVGS 123
               L+S+      L+  T+           +F ALHG +GE+G  Q      G+P  G 
Sbjct: 48  ----LLSL-----DLAKFTR-----------VFLALHGGFGENGMAQAYLEGLGIPYNGP 87

Query: 124 GVLGSAMAMDKDVTKRMVQSAGLVVVPWLAMNSMRP--WEELVECLGSSTLFVKPATSGS 181
               SA+ MDK +TK + +  G+ V  +L   +     +EE+ E LG+  + VKP   G 
Sbjct: 88  SPQASAICMDKLLTKHIARGLGINVANYLYSKNGDDVCFEEISERLGTPCI-VKPNREGC 146

Query: 182 SIGVSRVSN-ALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEGLMASVVGEIIK 240
           S GVS V +   +   A   AA+  T +L+E  + G E+    L      + +V  E   
Sbjct: 147 SFGVSLVRDLKADLQPAINAAAKFHTGILIEEFISGPELSVCYLNKSTLPIYTVEFE--- 203

Query: 241 KEGHAYYDYQAKYDSNSVTG-LRVPSLLPPDIVARIQALSVQAFRCLELKGYARVDFFLT 299
                ++ Y AK+ S      L +       +V    +   +A   LEL  Y R D F+ 
Sbjct: 204 ---SDFFSYDAKFISTKTNATLTILDRSTHQLVTNYCSAIAEA---LEL-DYFRAD-FIV 255

Query: 300 EEGEIILNEINTLPGFTSASMYPKMFECSGYPPPKLV 336
              E  L E+NTLPG TS S++PK  +  G    KLV
Sbjct: 256 HNTEPYLIELNTLPGLTSHSLFPKACQQHGIEFDKLV 292