Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 364 a.a., D-alanine--D-alanine ligase A (EC 6.3.2.4) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  237 bits (604), Expect = 4e-67
 Identities = 138/350 (39%), Positives = 202/350 (57%), Gaps = 15/350 (4%)

Query: 6   IALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWRYQGEPCQFPGAVDR- 64
           + +VFGG+S+EH V+L+SA  I  A+      V  +GID+ G W           A D  
Sbjct: 6   VGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKAGQWHVNDAENYLQNADDPA 65

Query: 65  ------SAPLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGL 118
                 SA  ++  PG         ++G     +D++FP +HG  GEDG++QG+  +  L
Sbjct: 66  HIALRPSAISLAQVPGKHQHQLINAQNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVANL 125

Query: 119 PCVGSGVLGSAMAMDKDVTKRMVQSAGLVVVPWLAMNSMR----PWEELVECLGSSTLFV 174
           P VGS VL SA  MDKDV KR+++ AGL + P++ +         + E+   LG   LFV
Sbjct: 126 PFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFITLTRTNRHAFSFAEVESRLGLP-LFV 184

Query: 175 KPATSGSSIGVSRVSNALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEGLMASV 234
           KPA  GSS+GVS+V+N  +Y  A A+A   D KV+VE  + GREIEC VL   +   AS 
Sbjct: 185 KPANQGSSVGVSKVANEAQYQQAVALAFEFDHKVVVEQGIKGREIECAVLG-NDNPQAST 243

Query: 235 VGEIIKKEGHAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYARV 294
            GEI+      +Y Y  KY  ++   + VP+ +P ++  +I+A+++QA++ L   G ARV
Sbjct: 244 CGEIVLNS--EFYAYDTKYIDDNGAQVVVPAQIPSEVNDKIRAIAIQAYQTLGCAGMARV 301

Query: 295 DFFLTEEGEIILNEINTLPGFTSASMYPKMFECSGYPPPKLVGALVEYGL 344
           D FLT + E+++NEINTLPGFT+ SMYPK+++ SG     L+  L+E  L
Sbjct: 302 DVFLTADNEVVINEINTLPGFTNISMYPKLWQASGLGYTDLISRLIELAL 351