Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 364 a.a., D-alanine--D-alanine ligase from Escherichia coli ECRC62

 Score =  236 bits (602), Expect = 7e-67
 Identities = 141/355 (39%), Positives = 205/355 (57%), Gaps = 15/355 (4%)

Query: 1   MKQNVIALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWRYQGEPCQFPG 60
           M++  + +VFGG+S+EH V+L+SA  I  A+      V  +GID++G W           
Sbjct: 1   MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVSDASNYLLN 60

Query: 61  AVDR-------SAPLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLA 113
           A D        SA  ++  PG         ++G   + +D++F  +HG  GEDG++QG+ 
Sbjct: 61  ADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLLTVDVIFAIVHGTLGEDGSLQGML 120

Query: 114 AMCGLPCVGSGVLGSAMAMDKDVTKRMVQSAGLVVVPWLAMNSMR----PWEELVECLGS 169
            +  LP VGS VL SA  MDKDVTKR+++ AGL + P++ +         + E+   LG 
Sbjct: 121 RVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGL 180

Query: 170 STLFVKPATSGSSIGVSRVSNALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEG 229
             LFVKPA  GSS+GVS+V++  +YA A  +A   D KV+VE  + GREIEC VL   + 
Sbjct: 181 P-LFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKVIVEQGIKGREIECAVLG-NDN 238

Query: 230 LMASVVGEIIKKEGHAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELK 289
             AS  GEI+      +Y Y  KY       + VP+ + P+I  +I+A++VQA++ L   
Sbjct: 239 PQASTCGEIVLTSD--FYAYDTKYIDEDGAKVVVPAAIAPEINDKIRAIAVQAYQTLGCA 296

Query: 290 GYARVDFFLTEEGEIILNEINTLPGFTSASMYPKMFECSGYPPPKLVGALVEYGL 344
           G ARVD FLT E E+++NEINTLPGFT+ SMYPK+++ SG     L+  L+E  L
Sbjct: 297 GMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELAL 351