Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 366 a.a., D-alanine--D-alanine ligase from Dickeya dianthicola ME23

 Score =  250 bits (639), Expect = 4e-71
 Identities = 146/358 (40%), Positives = 217/358 (60%), Gaps = 19/358 (5%)

Query: 6   IALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWRYQGEPCQFPGA---- 61
           + +VFGG+SSEH V+L+SA  I  A+      V  +GID++G W           A    
Sbjct: 6   VGVVFGGKSSEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKQGEWHVNDASNYLLNADNPA 65

Query: 62  ---VDRSAPLISIRPG--HRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMC 116
              ++RS+  +++ PG  H  L  TT  S   +I  D++FP +HG  GEDG++QGL  M 
Sbjct: 66  LIALNRSSQNVALIPGQTHHQLIDTTSASALSQI--DVIFPIVHGTLGEDGSLQGLLRMA 123

Query: 117 GLPCVGSGVLGSAMAMDKDVTKRMVQSAGLVVVPWLAMN----SMRPWEELVECLGSSTL 172
            +P VGS VLGSA++MDKDVTKR+++  GL V P++ +     +   + +L   LG   L
Sbjct: 124 NIPFVGSSVLGSAVSMDKDVTKRLLRDVGLQVAPFVTLTRANRARHAYGDLTAQLGLP-L 182

Query: 173 FVKPATSGSSIGVSRVSNALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEGLMA 232
           FVKPA  GSS+GVS+V N  E+  A A+A R D KVLVE+A+ GREIEC VL   +   A
Sbjct: 183 FVKPANQGSSVGVSKVRNQAEFEQAVALAFRYDHKVLVESAIVGREIECAVLG-NDYPKA 241

Query: 233 SVVGEIIKKEGHAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYA 292
           SV GEI+  +   +Y Y  KY +     + +P+ +  ++   I+ +++ AF+ L+ +G A
Sbjct: 242 SVCGEIVLHD--EFYSYDTKYINEDGAAVAIPAAMDDEVHQHIRDIALLAFQTLDCQGMA 299

Query: 293 RVDFFLTEEGEIILNEINTLPGFTSASMYPKMFECSGYPPPKLVGALVEYGLSSASKE 350
           RVD FLT + ++++NE+NTLPGFT+ SMYPK++E SG     L+  L+E  L   +++
Sbjct: 300 RVDVFLTPDQQVVVNEVNTLPGFTNISMYPKLWEASGLGYTDLITQLIELALERHAQD 357