Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 308 a.a., D-alanylalanine synthetase from Agrobacterium fabrum C58

 Score =  140 bits (353), Expect = 4e-38
 Identities = 113/342 (33%), Positives = 163/342 (47%), Gaps = 51/342 (14%)

Query: 6   IALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWRYQGEPCQFPGAVDRS 65
           +A++ GG SSE  V+L S      AL   G++V  V + R                 D +
Sbjct: 6   VAVLLGGFSSERPVSLSSGNACALALEGEGYKVTRVDVGR-----------------DVA 48

Query: 66  APLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGLPCVGSGV 125
           A L  +RP                   D+ F ALHG +GEDGTIQG+     +P   SGV
Sbjct: 49  AVLDELRP-------------------DVAFNALHGPFGEDGTIQGILEYLAIPYTHSGV 89

Query: 126 LGSAMAMDKDVTKRMVQSAGLVVVPWLAMNSMRPWEELVECLGSSTLFVKPATSGSSIGV 185
           L SA+AMDK   K++  +AG+ V     MN    ++   E        VKP   GSS GV
Sbjct: 90  LASALAMDKAQAKKVAAAAGIPVAGERVMNR---FDFTSEHPLQPPYVVKPVREGSSFGV 146

Query: 186 SRVSNALEYAAAFAIAAR--EDTKVLVEAAVCGREIECGVLELEEGLMASVVGEIIKKEG 243
             V     +      ++      +V+VE  + GRE+ CGVL+ E    A  V E++   G
Sbjct: 147 VIVKEDQSHPPQILTSSEWPFGNQVMVERYIHGRELTCGVLDGE----ALGVTEVVPL-G 201

Query: 244 HAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYARVDF----FLT 299
           H +YDY AKY +     + +P+ + P I  +IQ L+V A + +  +G +R DF      +
Sbjct: 202 HNFYDYDAKYAAGGSKHV-IPAGISPKIYQKIQTLAVMAHQAIGCRGVSRSDFRYDDRFS 260

Query: 300 EEGEIILNEINTLPGFTSASMYPKMFECSGYPPPKLVGALVE 341
           E+GE+I  E+NT PG T  S+ P+M   +G     LV  +VE
Sbjct: 261 EDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRSFGDLVSWMVE 302