Pairwise Alignments

Query, 709 a.a., flagellar export pore protein from Pseudomonas putida KT2440

Subject, 693 a.a., Flagellar biosynthesis protein FlhA from Xanthobacter sp. DMC5

 Score =  429 bits (1102), Expect = e-124
 Identities = 246/690 (35%), Positives = 417/690 (60%), Gaps = 14/690 (2%)

Query: 19  RGNLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTIL 78
           R ++G  + ++ +LA++ LPIPP L+D+    +IALS+++L+V ++  +PL+F+AFPT+L
Sbjct: 14  RRDIGFAMGMVGILAILFLPIPPALIDIGLALSIALSVLILMVALWIDKPLEFSAFPTVL 73

Query: 79  LVATLLRLALNVASTRVVMLHGQEGHGAAGKVIQAFGEVVIGGNYVVGAVVFAILMIINF 138
           L+ATLLRL L VA+TR+++ HG +G  AAG +I  F ++V+ G++V+G VVF IL+ +NF
Sbjct: 74  LIATLLRLGLGVATTRLILAHGSDGVSAAGHIIHGFSQLVMSGDFVIGIVVFLILVTVNF 133

Query: 139 VVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKHRRAEVAQEAEFYGSM 198
           +V+TKGA RI+EV ARFTLDA+PGKQMAIDADLNAGLID  QA+ RRAE+ +E+ F+GSM
Sbjct: 134 LVITKGATRIAEVGARFTLDAIPGKQMAIDADLNAGLIDDKQAQRRRAELEEESAFFGSM 193

Query: 199 DGASKFVRGDAIAGLLILFINLIGGMLIGMLQHNMSFSEAGKVYALLTIGDGLVAQLPSL 258
           DGASKFVRG+A+A L+ + +N+ GG++IG+ +H M  ++A  ++  L++GDGLV+Q+P+L
Sbjct: 194 DGASKFVRGEAVASLITIAVNIFGGIIIGVTRHKMPIADAADIFTRLSVGDGLVSQIPAL 253

Query: 259 LLSTAAAIMVTRASGSEDMGKLINRQMFDSPKALAVSGALMIVMGLVPGMPHIAFLSLGL 318
           ++S +A ++V++        K +  Q+   P+AL V+  L++ + LVPG+P + F  +G 
Sbjct: 254 IVSLSAGLLVSKGGTRGRAEKAVLGQLGAYPRALFVAAGLLLALALVPGLPFLPFAIIGG 313

Query: 319 MAAGGAYLVWK-KQQQAKVKAQQEAQRQQDLLPSPQRALETKELGWDDVTPIDMIGLEVG 377
           M    A++ W   +Q A+ KA+ +A R+ D      R  E +E   + +   + I + VG
Sbjct: 314 MM---AFVGWSVPRQLARQKAEADA-READAKQQADR--EARESVKEQLKTAE-IEVCVG 366

Query: 378 YRLIPLVDRNQGGQLLARIKGVRKKLSQDLGFLMPTVHIRDNLDLQPSAYRLTLMGVILA 437
            +L   V R    +L  R+  +R+K +   GF++P + + ++L      Y++ + G +LA
Sbjct: 367 KQLATQVLRTP-SELGNRLGKMRRKFALRYGFVVPEIRMTESLAAPAKGYQIKMHGTVLA 425

Query: 438 EAEIYPDRELAINPGQVFGTLNGIAARDPAFGLEAVWIDVGQRSQAQSLGYTVVDASTVV 497
             E+     L +        + G  AR+PAFG++A+WI     ++ +  G+  VD  TV+
Sbjct: 426 AQEMRIGELLVVVGDGPPPDVPGDEAREPAFGMKAMWIPEAYATEVKREGFAPVDNLTVI 485

Query: 498 ATHLNQILQKHCHELIGHEEVQQLLQVLAKASPKLAEELVPGVISLSGLLKVLQALLSEQ 557
            THL++ +  +  +L+ ++ ++ L+  L     +L E++ P  IS SGL  VL+ LL+E+
Sbjct: 486 LTHLSEAIANNLPQLLSYKSMRSLIDRLDPEYKRLVEDICPAQISYSGLQAVLKLLLAER 545

Query: 558 VPVRDIRSIAEAIANNAGKSQDTAALVAAVRVGLCRAIVQSIV--GVESELPVITLEPRL 615
           V +R++  I EA+A     ++ +  +   VR+ + + I   +   GV   L V+ L  R 
Sbjct: 546 VSIRNLHLILEAVAEIVPHARRSEQVAEHVRMRMAQQICGDLAEGGV---LNVLRLGSRW 602

Query: 616 EQILLNSLQRAGQGQEDGVLLEPSMAEKLQRSLIEAAQRQEMQGQPAILLVAGPIRAMLS 675
           +     SL+R  +G+     ++P + E+       A + +   G P +L+ A   R  + 
Sbjct: 603 DLAFHQSLKRDAKGEVIEFDIDPRLVEQFGTEAATAVRERMKAGAPFVLVTAPDARPYVR 662

Query: 676 RFGRLAVPNLHVLAYQEIPDNKQVTIVATV 705
                  P+L VL++ EI    ++  +  +
Sbjct: 663 MIVERMFPSLPVLSHVEIARGVEIKALGAI 692