Pairwise Alignments

Query, 709 a.a., flagellar export pore protein from Pseudomonas putida KT2440

Subject, 699 a.a., Flagellar biosynthesis protein FlhA from Variovorax sp. SCN45

 Score =  727 bits (1877), Expect = 0.0
 Identities = 375/708 (52%), Positives = 512/708 (72%), Gaps = 15/708 (2%)

Query: 4   TQLISNARNNLAGLGRGNLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCV 63
           T L+       +G     L  P+L++++L+MM+LP+PPFLLD+ FTFNIA+S++VLLV +
Sbjct: 5   TNLLRLPTQMFSGSQFKGLAGPILIIMILSMMVLPLPPFLLDLLFTFNIAMSVMVLLVSM 64

Query: 64  YALRPLDFAAFPTILLVATLLRLALNVASTRVVMLHGQEGHGAAGKVIQAFGEVVIGGNY 123
           Y ++ LDFAAFP +LL +TLLRL+LNVASTRVV++HG  G  AAGKVI+AFG  ++GGN+
Sbjct: 65  YTMKALDFAAFPAVLLFSTLLRLSLNVASTRVVLMHGHTGPDAAGKVIEAFGHFLVGGNF 124

Query: 124 VVGAVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKH 183
            VG +VF IL++INF+V+TKGAGRI+EV ARF LDAMPGKQMAIDADLNAGLI +  A+ 
Sbjct: 125 AVGVMVFIILVLINFMVITKGAGRIAEVGARFMLDAMPGKQMAIDADLNAGLIGEEVARK 184

Query: 184 RRAEVAQEAEFYGSMDGASKFVRGDAIAGLLILFINLIGGMLIGMLQHNMSFSEAGKVYA 243
           RR EVAQEA+FYGSMDGASKFVRGDAIAGLLI+ IN+IGG+++GM+QH + FS AGK Y 
Sbjct: 185 RRQEVAQEADFYGSMDGASKFVRGDAIAGLLIMVINIIGGLIVGMVQHGLDFSTAGKTYT 244

Query: 244 LLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKLINRQMFDSPKALAVSGALMIVMG 303
           LL IGDGLVAQ+P+L++STAA ++V+R +  ED+G  +  Q+F +P+ L ++  ++ ++G
Sbjct: 245 LLAIGDGLVAQIPALVISTAAGVIVSRVTTDEDVGSQLTGQLFANPQVLFLTAGIVGLLG 304

Query: 304 LVPGMPHIAFLSLGLMAAGGAYLVWKKQQQAKVKAQQEAQRQQDLLPSPQRAL--ETKEL 361
           ++PGMP++AF    L+ AGG  LVW  ++  K K QQ+A ++     +   A   E  E 
Sbjct: 305 MIPGMPNLAF----LLIAGG--LVWLGRRLVKRKPQQQAAQEAAAAQAATLAPGGEMAEA 358

Query: 362 GWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVRKKLSQDLGFLMPTVHIRDNLD 421
            WDDV  +D +G++VGYRLIPLVD++Q G+LL RIK +RKK++QD+GFL+P VHIRDNL+
Sbjct: 359 TWDDVAMVDPLGMQVGYRLIPLVDQSQQGELLGRIKSIRKKIAQDIGFLVPVVHIRDNLE 418

Query: 422 LQPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGTLNGIAARDPAFGLEAVWIDVGQRS 481
           ++P+ Y ++L  V +   E +P++ +AINPGQV GTL G   RDPAFGL AVWID  QR 
Sbjct: 419 IKPNTYVISLKDVEIGRGEAFPNQWMAINPGQVSGTLPGAPTRDPAFGLPAVWIDASQRQ 478

Query: 482 QAQSLGYTVVDASTVVATHLNQILQKHCHELIGHEEVQQLLQVLAKASPKLAEELVPGVI 541
           QAQ  GYTVVDA TV+ATHLN ++Q H  EL+G +EVQQLL  +AK +PKL E+LVP V+
Sbjct: 479 QAQVYGYTVVDACTVMATHLNHLIQTHAAELLGRQEVQQLLDQIAKTAPKLTEDLVPKVL 538

Query: 542 SLSGLLKVLQALLSEQVPVRDIRSIAEAIANNAGKSQDTAALVAAVRVGLCRAIVQSIVG 601
           SLS L KVLQ LL E+VP+RD+R+I + +A +A   +D   L    R+ L RAI Q +  
Sbjct: 539 SLSTLHKVLQNLLDEEVPIRDMRTILDVMAEHAPTIKDPTELTTLTRLALGRAITQQLFP 598

Query: 602 VESELPVITLEPRLEQILLNSLQRAGQGQEDGVLLEPSMAEKLQRSLIEAAQRQEMQGQP 661
            ++E+ VI L+  L+ +L  +L  +G        +EP +A+ L      A QRQE  G  
Sbjct: 599 GDAEMQVIGLDGALDGVLQQALSNSGG-------IEPGIADNLLHQAQAAIQRQEQMGLA 651

Query: 662 AILLVAGPIRAMLSRFGRLAVPNLHVLAYQEIPDNKQVTIVATVGPNG 709
            +L+V   +R +LSRF R ++P L VL++ EIPD++ + I A +G  G
Sbjct: 652 PVLVVQHSLRVLLSRFLRRSLPQLKVLSHAEIPDSRTIKITAAIGGRG 699