Pairwise Alignments

Query, 709 a.a., flagellar export pore protein from Pseudomonas putida KT2440

Subject, 705 a.a., Flagellar biosynthesis protein FlhA from Sphingobium sp. HT1-2

 Score =  611 bits (1576), Expect = e-179
 Identities = 326/683 (47%), Positives = 469/683 (68%), Gaps = 15/683 (2%)

Query: 24  VPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTILLVATL 83
           +P   L+++  MM+P+P  +LD+ F  NI +S+ VL+V + A +PLDF++FPT+LL ATL
Sbjct: 20  LPFATLMVVLFMMVPVPAVMLDIGFITNIMISLAVLMVALNAAKPLDFSSFPTVLLFATL 79

Query: 84  LRLALNVASTRVVMLHGQEGHGAAGKVIQAFGEVVIGGNYVVGAVVFAILMIINFVVVTK 143
           LRLALNVASTRVV++ G EG  AAG+VI+AFG  +IGG+YVVG  VFAILMIIN VV+TK
Sbjct: 80  LRLALNVASTRVVLVSGHEGSDAAGQVIEAFGHFLIGGDYVVGIFVFAILMIINLVVITK 139

Query: 144 GAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKHRRAEVAQEAEFYGSMDGASK 203
           GAGR+SEVSARFTLDA+PGKQMAIDADLNAGL+   +AK RRAEVA EA+FYGSMDGASK
Sbjct: 140 GAGRVSEVSARFTLDALPGKQMAIDADLNAGLMTPEEAKLRRAEVATEADFYGSMDGASK 199

Query: 204 FVRGDAIAGLLILFINLIGGMLIGMLQHNMSFSEAGKVYALLTIGDGLVAQLPSLLLSTA 263
           FV+GDAIAG+LIL IN+IGG+++G++ H ++  +A + Y LL IGD LVAQ+P+LLLS A
Sbjct: 200 FVKGDAIAGILILAINIIGGIILGVVSHGLAMGDAAQTYILLAIGDALVAQIPALLLSIA 259

Query: 264 AAIMVTRASGSEDMGKLINRQMFDSPKALAVSGALMIVMGLVPGMPHIAFLSLGLMAAGG 323
           AA +VTR    +D+   +  Q F + KA     A++  +G++PGMPH+  L+   +A G 
Sbjct: 260 AASIVTRVKSEQDLSAQVAGQ-FGTGKAWVPVAAILGFLGILPGMPHLIILTAAAIAGGI 318

Query: 324 AYLVWKKQQQAKVKAQQEAQRQQDLLPSPQRALETKELGWDDVTPIDMIGLEVGYRLIPL 383
           A+       Q +   Q++A   + + P P  A+    + W+DV+   ++GLE+GY LI L
Sbjct: 319 AW-------QLRKAGQRKAAEPEPVAPPPNPAI----IEWNDVSDGAILGLEIGYGLIGL 367

Query: 384 VDRNQGGQLLARIKGVRKKLSQDLGFLMPTVHIRDNLDLQPSAYRLTLMGVILAEAEIYP 443
           VD  +G  L+ARI G+R++LS++LGF++P V ++DNL L+P+ YR+T+ GV++ E +I+P
Sbjct: 368 VDERKGAPLMARITGIRRQLSKELGFVVPMVRVKDNLALEPNQYRITIAGVVVGEDDIWP 427

Query: 444 DRELAINPGQVFGTLNGIAARDPAFGLEAVWIDVGQRSQAQSLGYTVVDASTVVATHLNQ 503
           D  LA++ G + GT+ G  A+DP FGL+AVWI   +RS+A   GYTVVD  TVVATHLNQ
Sbjct: 428 DDLLALDSGMLEGTVAGRPAKDPTFGLDAVWISPAKRSEAVVAGYTVVDPPTVVATHLNQ 487

Query: 504 ILQKHCHELIGHEEVQQLLQVLAKASPKLAEELVPGVISLSGLLKVLQALLSEQVPVRDI 563
           ++  +  E+ G +E ++LL  L   +P+L + L PG +SL+ +  + +ALLSE + ++D 
Sbjct: 488 LIAMNAAEMFGLDEARKLLDNLKDVAPQLVDGLTPGTLSLTQISALCRALLSEGIALKDF 547

Query: 564 RSIAEAIANNAGKSQDTAALVAAVRVGLCRAIVQSIVGVESELPVITLEPRLEQILLNSL 623
           R I EA+ + A    +   LV AVR  +   I+Q +V V+  LPVITL+  LE +L  ++
Sbjct: 548 RRICEAMVDAARPDMNHEQLVEAVRQRIGALIIQGLVPVKMPLPVITLDGDLEAMLAQAM 607

Query: 624 QRAGQGQEDGVLLEPSMAEKLQRSLIEAAQRQEMQGQPAILLVAGPIRAMLSRFGRLAVP 683
           + AG  +     +EPS+  ++  S++ AA+    Q +   ++ +   R  L+R  +  +P
Sbjct: 608 RVAGDAKHP---IEPSLGNRIVESVVHAARPMLGQARNFAIVTSPVARRALARLFKPHLP 664

Query: 684 NLHVLAYQEIPDNKQVTIVATVG 706
              VL++ EIPD K V +VA VG
Sbjct: 665 ETPVLSFLEIPDGKGVEVVAVVG 687