Pairwise Alignments

Query, 277 a.a., flagellar synthesis regulator, putative ATPase from Pseudomonas putida KT2440

Subject, 265 a.a., Flagellum site-determining protein YlxH from Azospirillum sp. SherDot2

 Score =  139 bits (351), Expect = 5e-38
 Identities = 88/240 (36%), Positives = 123/240 (51%), Gaps = 1/240 (0%)

Query: 9   VIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPKRTLADVIE 68
           VIAV  GKGGVGKT  S+ LS AL + G   +L D DLGLANVD+ LG +PK  L  VI 
Sbjct: 21  VIAVASGKGGVGKTWFSITLSHALTKAGMNTLLFDGDLGLANVDIQLGFSPKNDLGAVIN 80

Query: 69  GRCELRDVMLQGPG-GVRIVPAASGTQSMVHLAPAQHAGLIQAFSEIGDNLDVLVIDTAA 127
           G   L     +    G  I+   SG+ ++  L   + + L     E+  + D +V+D  A
Sbjct: 81  GEVTLAKAAQRFTDTGFDIIAGRSGSGTLAQLPSQRLSSLRNDLLELARSYDRVVMDMGA 140

Query: 128 GIGDSVVSFVRAAQEVLLVVCDEPTSITDAYALIKLLNRDYGMNRFRVLANMAQSPQEGR 187
           G+  +V +    A   L+V  DEPTS+TDAYA IKL +        R++ NMAQS ++G 
Sbjct: 141 GVDRTVRTLSGPAGITLVVTTDEPTSLTDAYAFIKLTHATNPSADLRIVVNMAQSVKDGE 200

Query: 188 NLFAKLTKVTDRFLDVALQYVGAVPYDECVRKAVQKQRAVYEAFPRSKCALAFKAIAQKV 247
             +  + K    FL       G +  D  VR A++ Q  +    P S  A   +AI Q++
Sbjct: 201 RTYGTILKACQNFLKYKPALAGIIRRDLKVRDAIRNQTPLLTRSPASDAARDVEAIVQRL 260