Pairwise Alignments

Query, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

Subject, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

 Score =  186 bits (471), Expect = 1e-50
 Identities = 167/600 (27%), Positives = 266/600 (44%), Gaps = 76/600 (12%)

Query: 164  SEFEQLLDSLDAIKAQ----AAADEQMQGETVSGAGDEITDAEFESLLDQLHGKG-QFNA 218
            ++ E+LL  LDA++A      AAD+  Q E           A    L+      G   N 
Sbjct: 1335 ADIEKLLGRLDALQATFDALRAADDATQVELAQLVASASASAPAAQLVQVAPEAGVPAND 1394

Query: 219  EVAAPPVAVSSEVVSDEITDAEFESLLDQLHGKGTFQAGALPAAQAPAPAAPDNSAASDE 278
            E AAP       V  DE  D E     D +       A AL    APA  AP  + +S  
Sbjct: 1395 ESAAP-------VAGDE--DGE---TADDIAAAAPATASALQPRPAPALLAPLRAVSSQA 1442

Query: 279  -------------------ISEHEFEALLDQLHGK-GKFGGDVAAVEAPAAVQAQAPAAA 318
                               I+    EA L QL G      G++  +      Q       
Sbjct: 1443 VRIRTQLLDRLVAQTGEVIITRSRLEAELGQLRGSLADLTGNLDRLR-----QQLRDIEV 1497

Query: 319  KAESQPVAKPAAAPAPSPASKPAAAPRAPAPAAEKHAASEAETTVRVDTARLDEIMNMVG 378
            +AESQ  ++ A A     +  P    R               T V+  T  + E +N V 
Sbjct: 1498 QAESQMQSRLAQAKDSQQSFDPLEFDRF--------------TRVQELTRMMAESVNDVA 1543

Query: 379  ELVLVRNRLVRLGLNSGDEAMSKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRD 438
             +     R ++  + + ++ +S         T +LQ  +++TRM   + +  R  R+VR 
Sbjct: 1544 TV----QRTLQKTVQATEDDLSVQARQ----TRELQRGLLRTRMVEFEGISDRLYRVVRQ 1595

Query: 439  LARQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIEMPDEREASGKARTGR 498
             ++   K++ L++VG   ++D+ +++ +     HL+RN V HGIE    RE +GK  +G 
Sbjct: 1596 ASKDTGKQVRLDIVGGSIEMDRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAGKDASGL 1655

Query: 499  VVLSAEQEGDHILLSISDDGKGMDPNILRAKAVEKGLMDKDAAERLSESDCYNLIFAPGF 558
            +V+    EG+ + +S  DDG G+D   +  +A   GL+  D  + LS  +   LIF PGF
Sbjct: 1656 IVIDLHHEGNDVSVSFRDDGAGLDRKRIAERARVLGLIGAD--QELSAEEATELIFKPGF 1713

Query: 559  STKTEISDVSGRGVGMDVVKTKISQLNGSINIFSAKGQGSKIVIKVPLTLAIMPTLMVML 618
            ST  ++S+++GRG+GMDVV+ +I+ L G I   S  GQG+   + +PLT A+   +M+  
Sbjct: 1714 STAGQVSELAGRGIGMDVVRAQIAALGGRIETHSTPGQGTTFKLVLPLTTAVTHVVMLRA 1773

Query: 619  GNQAFAFP--LVN-VNEIFHLDLSRTNVVDGQEVVIVRDKALPLFYLKRWLVQGQV---H 672
            G  +   P  LV  V  +   DL    + +         + +P FY    L+Q      H
Sbjct: 1774 GEVSIGVPSNLVELVQRVSGTDLDAAYLHNSHP---FGSEQVP-FYWAGALLQASTRSEH 1829

Query: 673  EEQHEGHVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALI 732
                   +V++    QR+   VD+++G +EVV+K LG  L   PG++G ++   G +ALI
Sbjct: 1830 AAAKNNTLVVVRSAAQRVALHVDEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALI 1889



 Score = 67.4 bits (163), Expect = 7e-15
 Identities = 71/228 (31%), Positives = 98/228 (42%), Gaps = 28/228 (12%)

Query: 6    DEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELVE 65
            D ++   F  EA E+L QL E L +    PDD+    A+ R  HT+KG A       L E
Sbjct: 1256 DVDLFPIFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGE 1315

Query: 66   CCHIAENVFDVL-RKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVTPATPALLAALS 124
              H  E+  ++L  +G  R D E +   L  LD + + F  +R   + T    A L A +
Sbjct: 1316 RAHRMESEIELLGSQGAERADIEKL---LGRLDALQATFDALRAADDATQVELAQLVASA 1372

Query: 125  RLAEPGAAEAVAAP---VP------APVA---------DVVAAAPAEAEEQHQDITDSEF 166
              + P A     AP   VP      APVA         D+ AAAPA A      +     
Sbjct: 1373 SASAPAAQLVQVAPEAGVPANDESAAPVAGDEDGETADDIAAAAPATASA----LQPRPA 1428

Query: 167  EQLLDSLDAIKAQAA-ADEQMQGETVSGAGDE-ITDAEFESLLDQLHG 212
              LL  L A+ +QA     Q+    V+  G+  IT +  E+ L QL G
Sbjct: 1429 PALLAPLRAVSSQAVRIRTQLLDRLVAQTGEVIITRSRLEAELGQLRG 1476



 Score = 57.4 bits (137), Expect = 8e-12
 Identities = 87/372 (23%), Positives = 143/372 (38%), Gaps = 34/372 (9%)

Query: 6    DEEILQD-FLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELV 64
            +E+ LQ+ FL EA E+++   E + EL S PDD + L  + R FHT+KG +  + L E  
Sbjct: 662  EEDDLQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMVGLTEFG 721

Query: 65   ECCHIAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVR-------ERAEVTPATP 117
            +     E V +     +R    EL+      L   +     +        + A  +    
Sbjct: 722  DAAWSLEQVLNTWLADQRAATPELLSGTERTLREFSEWVEAIAAGQPHSWQAASFSRVAN 781

Query: 118  ALLAA--LSRLAEPGAAEAVAAPVPAPVADVVAAAPAEAEEQHQDITD-SEFEQLLDSLD 174
            ALLA   +        AEA+A       A+   AAPA A      + D  +     + + 
Sbjct: 782  ALLAGEPVPPPVRVADAEALAVAARHIAAETPVAAPAVAPLPMPALPDLPDLSLTPEPVS 841

Query: 175  AIKAQAAADEQMQGETV-------SGAGDEITDAEFESLLDQLHGKGQFNAEVAAPPVAV 227
             ++  A    +   E         + A     D +F S  D +  + + N E  AP +++
Sbjct: 842  HVEPVAHVAPEPVPEPALEPLDWHAPAQSPEVDDDFAS-TDFIDFESKQNTE-PAPLLSL 899

Query: 228  SSEVVSDEITDAEFESLLDQLHGKGTFQAGALPAAQAPAPAAPDNSAASDEISEHEFEAL 287
             S    D +  A+ ++  +        +    PAA+   PA P  S  ++  +       
Sbjct: 900  PSGDEFDFLAPAKTQARAEP-------EPVVPPAAEPEVPAEPVASVETESPAATSLPDF 952

Query: 288  LDQLHGKGKFGGDVAAVEAPAAVQAQAP---AAAKAESQPVAKPAAAP----APSPASKP 340
            + +   + +     A  + P  ++A  P      K E Q  A+P  AP     P P   P
Sbjct: 953  VWEPEPEPEPVPVPAQAQEPEVIEAARPPHEEEPKPELQLAAEPEQAPEAAAEPEPEPAP 1012

Query: 341  AAAPRAPAPAAE 352
            AA   AP P  E
Sbjct: 1013 AAIEAAPEPEPE 1024