Pairwise Alignments

Query, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

Subject, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440

 Score =  213 bits (543), Expect = 5e-59
 Identities = 212/831 (25%), Positives = 348/831 (41%), Gaps = 142/831 (17%)

Query: 6    DEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELVE 65
            D +++  FL  A +IL      L   + +P   D L+ +     T+   A    L ++ +
Sbjct: 714  DPQLVASFLAHAMDILLDAETLLSRWQQQPGQRDALDNLLDQMTTLGHAAHLADLWQMDD 773

Query: 66   CCHIAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVTPATPALLAALSR 125
             C    +++  + +G    DA        A + +  M  +V    ++ P  P L+  L  
Sbjct: 774  VCEALLDLYGAVEEGSLPADARFFSQAQRAHEALLDMLDEVAAGQDIPPR-PELVDRLRN 832

Query: 126  LAEPGAAEAVAA-------------------------PVPAPVADVVAAAPAEAEEQHQD 160
            L +   A                              P+   VA+ +A  P    E+  +
Sbjct: 833  LLDQALAPDATGLVGIDTVTPLHPDMDLSDTLGLPRPPLQPQVAEPLAEEPESPGEELLE 892

Query: 161  ITDSEFEQLLDSLDAIKAQAAADEQMQGE---------TVSGAGDEITDAEFESLLDQLH 211
            +   E   +++S  A  A+  AD +   E         T+ G    +       L  +L 
Sbjct: 893  VFLEESSDIVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDLAHELE 952

Query: 212  GKGQFNAEVAAPPVAVSSEVVSDEITDAEFESLLDQLHGKGTFQAGALPAAQAPAPAAPD 271
               +  A    PP              A   +LL   H +      A+   Q P  AA  
Sbjct: 953  FLYELLAAGRLPP-------------SAPLFALLQNCHDRLAHMLDAVRLGQ-PLHAA-- 996

Query: 272  NSAASDEISEHEFEALLDQLHGKGKFGGDVAAVEAPAAVQAQAPAAAKAESQPVAKPAAA 331
             +A  D I      AL D   G+G                   P AA AE      PAAA
Sbjct: 997  -TALIDYIRNFSSAALTDSAAGQGP------------------PEAATAEI-----PAAA 1032

Query: 332  PAPSPASK---PAAAPRAPAPAAEKHAASEAETTVRVDTARLDEIMNMVGELVLVRNRLV 388
            P  +P       A         A +H+        +V+ A+   +  M   L  +R++L+
Sbjct: 1033 PERAPGDMVKVDAELLDDLGNLAGEHSIIRGRIEQQVNDAQF-ALNEMETTLERMRDQLL 1091

Query: 389  RLGLNS-----------GD----------------EAMSKAVSN-----LDV-------- 408
            RL + +           GD                + +S+A+       LD+        
Sbjct: 1092 RLDVETQGRISSRQQFEGDAYDDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLAQRA 1151

Query: 409  ------------VTADLQTAVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEET 456
                        V + LQ  +  T M P +++  R  R+VR +A +L K++ L +   E 
Sbjct: 1152 QEAYSLLQQQARVNSQLQEGLTATLMVPFERLVPRLQRVVRQVASELGKQVELVVGNAEG 1211

Query: 457  DLDKNLVEALADPLVHLVRNAVDHGIEMPDEREASGKARTGRVVLSAEQEGDHILLSISD 516
            +LD++++E +  PL H++RNAVDHG+E    R A+GK   G + L+   EG  I++ ++D
Sbjct: 1212 ELDRSVLERMVAPLEHMLRNAVDHGLESRAMRLAAGKPEQGTIHLNLLHEGADIVIEMTD 1271

Query: 517  DGKGMDPNILRAKAVEKGLMDKDAAERLSESDCYNLIFAPGFSTKTEISDVSGRGVGMDV 576
            DG G+    +R KA+++GL+D  A  +LS+ +    I  PGFST  +I+ +SGRG+GMDV
Sbjct: 1272 DGAGVPLEAVRRKAIKRGLLDPQA--QLSDHEILQFILRPGFSTAEKITQISGRGLGMDV 1329

Query: 577  VKTKISQLNGSINIFSAKGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHL 636
            V  ++ QL GS++I SA+G+G++ +I++P T++I   LMV LG + +A PL  +  I  +
Sbjct: 1330 VHEEVKQLGGSMSIESAQGKGARFLIRLPFTVSINRALMVHLGEEQYAIPLNTIEGIVRV 1389

Query: 637  ---DLSRTNVVDGQEVVIVRDKALPLFYLKRWLVQG----QVHEEQHEGHVVILSVGTQR 689
               +L+    +D    V    +   L YL   L+QG     +  +     V+++    Q 
Sbjct: 1390 PPAELAACYQLDSPRYVYAGHE-YELRYLGE-LLQGLPRPALLGQSVPLPVLLVHSKEQS 1447

Query: 690  IGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSMLK 740
                 D L    E+V+K LG       G+SGAT+ GDGR+ LILD+   L+
Sbjct: 1448 FAIQADSLSPSREIVVKSLGPQFAAVAGLSGATLLGDGRVVLILDLLGQLR 1498



 Score = 41.2 bits (95), Expect = 4e-07
 Identities = 22/84 (26%), Positives = 40/84 (47%)

Query: 4   GADEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNEL 63
           G D+E+ Q FL EAGE+L ++    +   +     + L  + R  HT+KG    +    +
Sbjct: 436 GIDDELRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAV 495

Query: 64  VECCHIAENVFDVLRKGERRVDAE 87
            E    AE++ + + +G   +  E
Sbjct: 496 AELAWGAEHLLNRVLEGRSVLSPE 519