Pairwise Alignments

Query, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

Subject, 2142 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  116 bits (291), Expect = 1e-29
 Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 2/237 (0%)

Query: 371  DEIMNMVGELVLVRNRLVRLGLNSGDEAMSKAVSNLDVVTADLQTAVMKTRMQPIKKVFG 430
            D+ ++    + L   ++V+L   + D    +A+         L   +   R  P+     
Sbjct: 1899 DDFLDRGERITLTAEQVVQLERLASDLLRGEAIDTAVPEIRRLLVEIGFLRKTPLCDTLS 1958

Query: 431  RFPRLVRDLARQLKKEINLELV--GEETDLDKNLVEALADPLVHLVRNAVDHGIEMPDER 488
                 V  +A +L+K +    +  GE+  +D          L H+ RNAV HGIE PD R
Sbjct: 1959 GHRNTVAQVAARLEKNVAPVEISGGEDIWIDPKTFAPFLRSLAHVFRNAVTHGIEDPDSR 2018

Query: 489  EASGKARTGRVVLSAEQEGDHILLSISDDGKGMDPNILRAKAVEKGLMDKDAAERLSESD 548
              +GK  +GR+     +  D I LSI+DDG G+D   +R + VE GLM  +A   ++E+ 
Sbjct: 2019 LLAGKNESGRITCKVGRTADSIHLSIADDGVGIDQGAVRTRVVEAGLMPAEAVAAMTEAQ 2078

Query: 549  CYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIFSAKGQGSKIVIKVP 605
              +LIF    +T   +   SGRGVG+  V+ + ++L G++ + +  GQG++ V  +P
Sbjct: 2079 VLDLIFLDSMTTNVHLDQFSGRGVGLAAVRAETAKLGGTVAVRTRPGQGTEFVFTLP 2135