Pairwise Alignments

Query, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

Subject, 749 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  170 bits (431), Expect = 2e-46
 Identities = 130/490 (26%), Positives = 221/490 (45%), Gaps = 54/490 (11%)

Query: 301 VAAVEAPAAVQAQAPAAAKAESQ--PVAKPAAAPAPSPASKPAAAP---------RAPAP 349
           +AA  +  +V A +PAAA+A  +  P  +  AA A S A    AA           A  P
Sbjct: 122 LAAGRSGGSVPAPSPAAARAAVRRPPAQRDRAADADSAALVRIAAQGLERLSETASALLP 181

Query: 350 AAEKHAA-SEAETTVRVDTARLDEIMNMVGELVLVRNRLVRLGLNSGDEAMSKAVSNLDV 408
             E  A   E   T+R +   LD        L +   R VR    +G +A+  A+     
Sbjct: 182 EVEAQAGLGEQLRTMRREWRALDRAWR---HLRVQIGRGVRADAGAGADALPSALDGRGA 238

Query: 409 VTA----------------------------------DLQTAVMKTRMQPIKKVFGRFPR 434
           + A                                   LQ  + + RM P +       R
Sbjct: 239 LPALMAFERRFRALGGALDSAHRSHDRLLWSMRRWGGGLQQDMRRLRMLPAENQLSGLGR 298

Query: 435 LVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIEMPDEREASGKA 494
           +VRD++R   KE+ +++ G E + D+ +++ L DP++H+ RNA+ HGIE P ER A GK 
Sbjct: 299 MVRDISRAEGKEVEVDVRGLEVEADRTVLQRLKDPILHIARNAISHGIETPAERLALGKR 358

Query: 495 RTGRVVLSAEQEGDHILLSISDDGKGMDPNILRAKAVEKGLMDK---DAAERLSESDCYN 551
              RV ++A  EG  + L I DDG+G+D   +  KA E+GL+D         + +     
Sbjct: 359 PAARVTIAASVEGARLRLRIEDDGRGLDRAAILRKAAERGLIDAADLSTGAEMPQERLTE 418

Query: 552 LIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIFSAKGQGSKIVIKVPLTLAIM 611
            +F PGFST  + ++++GRG+G+ + + ++ +L G++ I      G+ + I+VPL+L   
Sbjct: 419 FLFHPGFSTAAQTTELAGRGMGLAIARREVERLQGNLTIADRADGGTAVTIEVPLSLLSQ 478

Query: 612 PTLMVMLGNQAFAFPLVNVNEIFHLDLSRTNVVDGQEVVIVRDKALPLFYLKRWL-VQGQ 670
             + V++ +Q  A P  +V  +            G  +  + D+ +P+  L   L ++  
Sbjct: 479 RLVFVLVQDQTLAIPSADVVRLRTASAQSLFSGTGTPMTRIGDEEIPVTSLAALLGMEAP 538

Query: 671 VHEEQHEG-HVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRI 729
           V      G  +V++  G +R+   VD+ V   E V+    +    +    G  +  DG  
Sbjct: 539 VVPSAERGLSLVVVRAGDRRLALAVDRFVATRETVVTAAEETGLDSGRYLGTVLMDDGGP 598

Query: 730 ALILDVPSML 739
           AL+L++P ++
Sbjct: 599 ALVLNIPGLM 608



 Score = 54.7 bits (130), Expect = 2e-11
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 13/192 (6%)

Query: 7   EEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELVEC 66
           + +L  F +E  + L  +   L + E+  D  DL++ I R  H++KG A  + L E+   
Sbjct: 5   QRLLAAFDLEHKDHLAAIRNALRDAEATGDAPDLVD-IHRRAHSLKGAARAVDLPEVEAI 63

Query: 67  CHIAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVTPATPALLAALSRL 126
            H  E  F  ++KGE  +D   + VV  +LD +  +     +  +    T  +LA L  L
Sbjct: 64  SHRLEAAFIAVQKGEIPLDPASVGVVRRSLDAIEDLVAWSLQGGDPV-ETAGVLADLDAL 122

Query: 127 AEPGAAEAVAAPVPAPVADVVAAAPAEAEEQHQ-------DITDSEFEQLLDSLDA---- 175
           A   +  +V AP PA     V   PA+ +            I     E+L ++  A    
Sbjct: 123 AAGRSGGSVPAPSPAAARAAVRRPPAQRDRAADADSAALVRIAAQGLERLSETASALLPE 182

Query: 176 IKAQAAADEQMQ 187
           ++AQA   EQ++
Sbjct: 183 VEAQAGLGEQLR 194