Pairwise Alignments

Query, 285 a.a., flagellar motor protein from Pseudomonas putida KT2440

Subject, 351 a.a., Flagellar motor rotation protein MotB from Sphingobium sp. HT1-2

 Score = 80.1 bits (196), Expect = 6e-20
 Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 25/259 (9%)

Query: 8   EEHENHE--RWLVSYADFITLLFAFFVVMYSISSINEGKYKVI--------------SQA 51
           E H  H    W V+YADF+T + AFF++M+ + +  E + K +              S  
Sbjct: 24  EGHGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATTEKQRKALADYFTPTLVELKMNSAG 83

Query: 52  LLGVFN-DPERSMKPIPI-GDEQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVR 109
             G+F  D   + +  P  G +  L++          +Q    L A +    + I   + 
Sbjct: 84  STGMFGGDSLMAKENYPTTGGQGNLAITIPRDATGTKDQGGKALRAADRQKFENIKKQLE 143

Query: 110 DAFGD-----LINSDQMTVRGNELWIE-IELNSSLLFGSGDAMPSDKAFAIIEKVASILK 163
           D         L  + + T     L I+ I+     +F SG      +A A+I +VA  L 
Sbjct: 144 DRMSKKGLARLRKNVRFTETREGLRIDLIDEADFAMFRSGTDQLLPEAKALIAEVADALA 203

Query: 164 PFANPVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQ 222
              NP+ V G TD LP  + +   NW LSSARA S  + LA  G+  AR A + G  + +
Sbjct: 204 TMPNPLIVRGHTDGLPYASGRSMNNWMLSSARAESTRKALAETGIPNARFARIEGVADRE 263

Query: 223 PVASNDTAEGRARNRRVVL 241
           P   +D  + R R   V+L
Sbjct: 264 PFVKSDAYDPRNRRMSVIL 282