Pairwise Alignments

Query, 518 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 525 a.a., flagellar hook-length control protein FliK from Pseudomonas simiae WCS417

 Score =  540 bits (1390), Expect = e-158
 Identities = 285/505 (56%), Positives = 368/505 (72%), Gaps = 6/505 (1%)

Query: 20  AGMTGDLLRLIQAQPGLLAPGETAQAEVLSLRQTGQDFQLVLRLMQANGVQTQLQANASQ 79
           A + G+LL+L++ Q GL+ PG+TA AEV++L+Q G+ FQL+L+L    G QT +QA++ Q
Sbjct: 21  APVAGELLKLLEPQIGLIDPGKTANAEVIALKQGGEAFQLLLKLTLEGGRQTLVQASSPQ 80

Query: 80  PLPQGSQITVSQTESNRLAIMLQQASASQVATLTQLDTSKVPVGTLLQGKVLTNQLLAQA 139
           PLP GS + VSQT +  L + LQQA ++ VA LT++DT ++PVGTLLQ KVLT Q+L Q 
Sbjct: 81  PLPLGSNVAVSQTPTGNLTLSLQQALSANVAALTRIDTDQMPVGTLLQAKVLTTQMLPQG 140

Query: 140 PGQPAVYRALVSLLNSNQAGATLSIDSPRPLVIGSLLSALVQGDQSLRFVPLSGRQDQLS 199
             QPA+YR+LV++LNS  AGATLS++SP+PL +GSLLSA+VQ  Q+L FVPLSG +DQL+
Sbjct: 141 TAQPAIYRSLVTVLNSALAGATLSVESPQPLRVGSLLSAVVQNTQTLSFVPLSGLKDQLA 200

Query: 200 IAQQLLTQQNRQASLPGLLNALQQLTRDPGVDGDLRASAERLLASLPDARQLGDAKAVAQ 259
           + QQL TQQ+RQ SL  +  ALQ L R      +LR +AERLLA+LPD  Q+ + K +AQ
Sbjct: 201 VTQQLSTQQSRQGSLDAVFTALQNLPRGDTTSAELRGAAERLLAALPDLAQVSNPKVLAQ 260

Query: 260 ALNNSGSFLEAKLLSGSTASV-ATDLKAHLLRLMAQ-APALPAST---ANLNPASLAVTM 314
            + NSG+FLEAKLL+G    +   D+K  LLRL+A   PALPA+T   A L   +LA  +
Sbjct: 261 VIQNSGAFLEAKLLAGQNPQIPPLDMKGALLRLVADLLPALPANTNMNAILAANTLAQVL 320

Query: 315 PALARSALGMLERVSPKPQPGAFPLPSRLLKALEEEGDLQQLLRLAAAAVSRLQSHAMSS 374
           P   RS L  L +VS +  P  FPLP RL+  LE EGDL+ LLRLAA A+SRLQSH +SS
Sbjct: 321 PNFVRSPLNTLGQVSARQMPAGFPLPERLMAKLEGEGDLENLLRLAAGAISRLQSHQLSS 380

Query: 375 LQQTGTLENGNLQTTWQTEVPIRHGQDFIPLQVKLQREE-TPQQQADRQHEAQDPRQALW 433
           L+QTGT  +G LQTTWQ E+P+R  QD +PLQVK QREE  P +    + E +D +Q LW
Sbjct: 381 LEQTGTTADGRLQTTWQLEIPMRTLQDIVPLQVKFQREEPAPDKDQPDRKEKKDAKQMLW 440

Query: 434 RIELAFDLSPLGPLQVQAQLSEGRLSGQLWAEREQTARLIDTQLGALRARLLARGLEVGD 493
           R+ELAFD+ PLGPLQVQAQLS+G+LS QLWA R  TA LI++ LG LR RL+  G+ VGD
Sbjct: 441 RVELAFDMEPLGPLQVQAQLSQGKLSSQLWASRPFTASLIESHLGNLRERLVTSGINVGD 500

Query: 494 LECHPGIPPQGPRTRMEQRWVDETA 518
           L+CH G PP+GP+T +EQRWVDETA
Sbjct: 501 LDCHLGTPPRGPKTGLEQRWVDETA 525