Pairwise Alignments

Query, 397 a.a., putative D-amino acid dehydrogenase 2 small subunit from Pseudomonas putida KT2440

Subject, 367 a.a., D-amino-acid oxidase (EC 1.4.3.3) from Variovorax sp. SCN45

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 105/410 (25%), Positives = 157/410 (38%), Gaps = 90/410 (21%)

Query: 7   VIGGGVVGLATAYALVREGWSVDLIEARDSLASATSFANGGQLSYRYVAPLADAGVPWQA 66
           VIG G+VG A A+AL + G  V +++AR  +  AT  A  G L                 
Sbjct: 7   VIGAGIVGAACAHALAQAGLRVLVLDAR--IGGATG-AGMGHL----------------- 46

Query: 67  LGWLLRGESPLRLRL-RMDPAQWRWLLAFTLACRRSVNRRNAGQLLELALCSQAVLAQWR 125
              ++  ++   L L R   AQWR L                G+    + C    +A   
Sbjct: 47  ---VVMDDNAAELELSRRSVAQWRALAP------------RMGEDCAYSPCGTLWIAANA 91

Query: 126 EDHNLGDFGWRRNGKLVAFRSERAFAQGREQLTDPASQQVLAAAELRGLEPALDGAPFVG 185
           E+    +            + +R  A G +        ++L A+ L   EPAL       
Sbjct: 92  EEMAEAER-----------KQQRLHAHGIDG-------RLLTASGLARAEPALRK----- 128

Query: 186 GVFTAGEEVGDCHVFCLRLEALLRASGQCRFLLGRPVTQLVQRQGQVVALQ------LGD 239
           G+  A E  GD          +L A    R+LL +    +     +V A+Q      L D
Sbjct: 129 GLAGALEVPGD---------GILYAPNAARWLLAQAADAVRVEHAKVAAIQDDGTLRLAD 179

Query: 240 -QQLDVEQLVLCAGHRGPGLALPGVQIPVYPLKGYSLTAPISAGHLPPEVSLTDYERKI- 297
             +    ++VL  G     L     ++P+ P KG+ L      G +  ++    Y     
Sbjct: 180 GSRRSAPRIVLANGIEATALC---PELPIRPKKGHLLITDRYPGTVHHQLVELGYVTSAH 236

Query: 298 ----------VYARLGQQLRVAAMVDIVGFDESVDMRRLQSMRRLALETLPRAADYGQAV 347
                     V  R   QL V +       D +V+   L  M +  L+ LP  A+     
Sbjct: 237 HSDGDSVAFNVQPRPTGQLLVGSSRQFDTTDPAVEAPMLARMLQRTLDYLPGLANLNAVR 296

Query: 348 EWAGMRPATPTGVPIIGGTVYR-NLWLNLGHGALGFTLACGSAQRLARMM 396
            W GMR A+P G+P++G   +R  LWL +GH  LG T A GSA  LA +M
Sbjct: 297 SWTGMRAASPDGLPLLGRHPWREKLWLAVGHEGLGVTTAPGSAHLLAALM 346