Pairwise Alignments

Query, 397 a.a., putative D-amino acid dehydrogenase 2 small subunit from Pseudomonas putida KT2440

Subject, 413 a.a., D-amino acid dehydrogenase small subunit from Agrobacterium fabrum C58

 Score =  103 bits (257), Expect = 9e-27
 Identities = 112/408 (27%), Positives = 175/408 (42%), Gaps = 33/408 (8%)

Query: 5   VTVIGGGVVGLATAYALVREGWSVDLIEARDSLASATSFANGGQLSYRYVAPLADAGVPW 64
           V VIG GVVGL+ A A    G SV +I+ R+  A+  S  N G  ++  + PLA  G+ W
Sbjct: 6   VIVIGAGVVGLSAAIAAQGRGLSVTVID-REGPAAGASAGNAGAFAFTDILPLASPGILW 64

Query: 65  QALGWLLRGESPLRL----RLRMDPAQWRWLLAFTLACRRS-VNRRNAGQLLELALCSQA 119
           +A  WLL    PL +     L++ P    W+  F  AC  S V    A Q   + L    
Sbjct: 65  KAPKWLLDPLGPLSVPPAYALKIAP----WMFRFWRACAASKVEHSTAAQTAMMDLSRAE 120

Query: 120 VLAQWREDHNLGDFGWRRNGKLVAFRSERAF----AQGREQLTDPASQQVLAAAELRGLE 175
           +    R+   +     R+ G L  + SE  F    A  + +       + L   ++  ++
Sbjct: 121 LEPFLRKTDTIAML--RKEGNLQVYESEAEFESSLAGWKARERHGIEFRHLNTEQMSEIQ 178

Query: 176 PALDGAP-FVGGVFTAG-EEVGDCHVFCLRLEALLRASG---QCRFLLGRPVTQLVQRQG 230
           P +  AP F  G FT G   + D   + L L    R  G   +C       V  L   + 
Sbjct: 179 PGI--APRFTCGTFTPGWFSIADPKFYTLALADHFRTIGGRIEC-----LDVASLRPLED 231

Query: 231 QVVALQLGDQQLDVEQLVLCAGHRGPGLALP-GVQIPVYPLKGYSLTAPISAGHLPPEVS 289
            V  +    +     ++VL AG     +A   G +IP+   +GY+ T P  A  L  +V+
Sbjct: 232 GVEVVSHDGRTRKAGKVVLAAGAFSHRIARSLGEKIPLETERGYNTTLPAGAFDLRTQVT 291

Query: 290 LTDYERKIVYARLGQQLRVAAMVDIVGFDESVDMRRLQSMRRLALETLPRAADYGQAVEW 349
              +    V  RL   +RV   V++ G +   +  R +++   A   LP     G   +W
Sbjct: 292 FGGH--GFVVTRLSSGIRVGGAVELGGLELPANFARSEALLAKAKAFLPGLKTEG-GKQW 348

Query: 350 AGMRPATPTGVPIIGGTVY-RNLWLNLGHGALGFTLACGSAQRLARMM 396
            G RP+ P  +P IG   +   +    GHG LG T + G+A+ +A ++
Sbjct: 349 MGFRPSLPDSLPAIGQARHTARVVYAFGHGHLGLTQSAGTARIVADLL 396