Pairwise Alignments

Query, 307 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 300 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

 Score =  420 bits (1079), Expect = e-122
 Identities = 214/289 (74%), Positives = 243/289 (84%), Gaps = 1/289 (0%)

Query: 1   MDSSLRRGSLEMVAAMLISGTIGWFVLVSGQPVLDVVFWRCVFGAVTLLAICAAFGFLRP 60
           MD+S+RRGS EM+AAMLISGTIGWFVLVSG  V++VVFWRCV G +TLL +CA  G+LR 
Sbjct: 1   MDTSIRRGSWEMIAAMLISGTIGWFVLVSGVSVIEVVFWRCVIGGLTLLLVCALLGYLRL 60

Query: 61  GVISRTAFLLAIASGVAIVGNWLLLFASYARASIAIGTAVYNVQPFMLVGLAALFLGEKI 120
            +++     LA+ SGVAIVGNWLLLF SY+RASIAI TAVYNVQPFMLV LAA+FLGEKI
Sbjct: 61  DLLNGAKLGLAMLSGVAIVGNWLLLFESYSRASIAISTAVYNVQPFMLVMLAAVFLGEKI 120

Query: 121 TLAKVTWLSVAFLGMLAIVSAHGAGQSNGEDYLLGIALALGAAFLYAIAALIIKRLSGTP 180
           T+ K+ WLS+AFLGMLAIV+AHG  Q  G+DYL GIALALGAAFLYAIAALIIKRL   P
Sbjct: 121 TVQKLAWLSIAFLGMLAIVTAHG-DQQTGDDYLAGIALALGAAFLYAIAALIIKRLKEVP 179

Query: 181 PHLIALIQVTTGVLLLAPWVTLGGLPVEVPALASLLTLGMVHTGLMYVLLYSAIQRLPTA 240
           PHL+ALIQVTTG LLLAP V    LP    A A+L+TLG+VHTGLMYVLLY AIQ+LPTA
Sbjct: 180 PHLMALIQVTTGALLLAPMVPWNSLPATTNAWAALVTLGVVHTGLMYVLLYGAIQKLPTA 239

Query: 241 LTGALSFIYPIAAILVDWVAFGHRLAPLQWLGVGLILLAAAGMQQGWWF 289
           +TGALSFIYPIAAI VDW+AFGHRL  LQWLGV  ILLAAAG+Q+GWW+
Sbjct: 240 ITGALSFIYPIAAIFVDWIAFGHRLGWLQWLGVAAILLAAAGLQRGWWW 288