Pairwise Alignments

Query, 307 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 303 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 75/289 (25%), Positives = 131/289 (45%), Gaps = 32/289 (11%)

Query: 15  AMLISGTIGWF-------VLVSGQPVLDVVFWRCVFGAVTLLAICAAFGFLRPG--VISR 65
           AMLI+ ++ W        V V   P + +V  R    AV LL +C   G   P    + R
Sbjct: 7   AMLIALSLLWGGSFFFIGVAVKELPPVTIVTLRVSLAAVALLVVCRIMGLRLPREWAVWR 66

Query: 66  TAFLLAIASGVAIVGNWL-LLFASYARASIAIGTA-VYNVQPFMLVGLAALFL--GEKIT 121
             F      G+ ++ N +      + +  IA G A + N    +   + A FL   EK+T
Sbjct: 67  AFF------GMGLLNNIIPFCLIVWGQTQIASGLASILNATTPLFTVIVAHFLTADEKMT 120

Query: 122 LAKVTWLSVAFLGMLAIVSAHGAGQSNGEDYLLGIALALGAAFLYAIAALIIKRLS--GT 179
             K+  + + F+G+  ++     G S+G   L G    LGAA  Y+ A +  +R    G 
Sbjct: 121 GNKLAGVLIGFVGVATMIGPAAFGGSSG---LWGQIAILGAAISYSFAGIFGRRFKAMGV 177

Query: 180 PPHLIALIQVTTGVLLLAPWVTLGGLP--VEVPALAS---LLTLGMVHTGLMYVLLYSAI 234
           PP + A  Q+++  L+L P   L   P  + +P L +   L+ + ++ T L Y++ +  +
Sbjct: 178 PPLMTATGQISSSTLMLIPAALLIDKPWTLAMPGLGTWGALIGIALLSTALAYLIFFRIL 237

Query: 235 QRLPTALTGALSFIYPIAAILVDWVAFGHRLAPLQWLGVGLILLAAAGM 283
                     ++F+ P++AIL+  +  G +L    + G+ +I   AAG+
Sbjct: 238 ASAGATNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMI---AAGL 283