Pairwise Alignments

Query, 318 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 404 a.a., 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) from Variovorax sp. SCN45

 Score = 65.5 bits (158), Expect = 2e-15
 Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 20/216 (9%)

Query: 107 WLLGEPCQQREVIEDGLTYLLDLGVRQNNGLFLDMRYGRRWVREQAAGKR---VLNLFAY 163
           WL G+   +  + E G    LD+      G +LD R  R+   E A  +R   VLN F Y
Sbjct: 168 WLRGDGPTEIVIREHGWKLSLDIATGHKTGFYLDQRDSRQRFAELAQHRRFRRVLNCFCY 227

Query: 164 TCGFSVAAIAG-------GAEQVVNLDMAKSALSRGRDNHRLNGHDASRV--AYLGHELF 214
           T GF+VAA+AG          Q+V++D +  AL R R +  LNG +   +   +L   + 
Sbjct: 228 TGGFTVAALAGLKAANALQGAQLVSVDSSLPALERARGHLALNGFEGQGIEAEFLDANVN 287

Query: 215 KSWGKVRKYG-PYDLIIIDPPTF---QRGSFVLTQDYAKILRRLPELLSEGGTVLACVND 270
               +    G  +D I++DPP F      +    + Y  I R   +LL  GG +L     
Sbjct: 288 TVLREFIDQGRTFDAIVLDPPKFAPTAAHAERAARAYKDINRLALKLLEPGGVLLTFSCS 347

Query: 271 PGIGPEF---LIEGMAEQAPSLAYV-ERLENPPEFP 302
            GI  +    ++      A    Y+ ERL   P+ P
Sbjct: 348 GGISADLFHKIVASAGIDAGVDGYIAERLGAAPDHP 383