Pairwise Alignments

Query, 304 a.a., conserved inner membrane protein from Pseudomonas putida KT2440

Subject, 302 a.a., Inner membrane protein YedI from Variovorax sp. SCN45

 Score =  397 bits (1019), Expect = e-115
 Identities = 211/298 (70%), Positives = 247/298 (82%), Gaps = 8/298 (2%)

Query: 4   SSLLVLIDDIATLLDDVSLMTKVAAKKTAGVLGDDLALNAQQVTGVRADRELPVVWAVAK 63
           SSLL+L+DDIAT+LDDVS++TKVAAKKTAGVLGDDLALNAQQV+GVRA+RE+PVVWAV K
Sbjct: 3   SSLLLLLDDIATVLDDVSVLTKVAAKKTAGVLGDDLALNAQQVSGVRAEREIPVVWAVCK 62

Query: 64  GSFVNKAILVPAALLISAFIPWAVTPLLMLGGAFLCFEGFEKLAHKFLHSK--EEDEAQH 121
           GSF+NKAILVPAAL I  ++PW VTPLLM+GGAFLCFEG EKLAHKFLH K   ED  +H
Sbjct: 63  GSFINKAILVPAALAIGTWLPWLVTPLLMVGGAFLCFEGAEKLAHKFLHKKAHAEDTGRH 122

Query: 122 EARKEAVADASVDLVAFEKAKIKGAVRTDFILSAEIIAITLGIVADSPLTQQIIVLSGIA 181
           E   +AVADASVD+VA EK KIKGAVRTDFILSAEIIAITLG V   P T Q+ VL GIA
Sbjct: 123 E---QAVADASVDVVAIEKDKIKGAVRTDFILSAEIIAITLGTVQGQPFTTQLSVLVGIA 179

Query: 182 VVMTIGVYGLVGGIVKLDDLGLWMARKTSRLIQAVGNGILRAAPYMMKSLSVIGTAAMFL 241
           ++MTIGVYGLV GIVKLDD GL+++++     +AVG GIL AAP++MK+LSV GTAAMFL
Sbjct: 180 LIMTIGVYGLVAGIVKLDDAGLYLSQRAGAASRAVGRGILVAAPWLMKALSVAGTAAMFL 239

Query: 242 VGGGILVHGIEPLHHAIEAFSEGRG---GALTSALLNGGVGVLAGAVVLAVVSVAGKL 296
           VGGGILVHG+  L HA+E +++  G   G L S  +N GVGV+AGA+VLAVV + GKL
Sbjct: 240 VGGGILVHGVPALGHAVEDWAKATGGVFGTLGSMGVNAGVGVVAGAIVLAVVELVGKL 297