Pairwise Alignments

Query, 776 a.a., DNA ligase from Pseudomonas putida KT2440

Subject, 560 a.a., NAD-dependent DNA ligase LigB from Escherichia coli ECRC101

 Score = 97.1 bits (240), Expect = 2e-24
 Identities = 100/424 (23%), Positives = 178/424 (41%), Gaps = 49/424 (11%)

Query: 108 DYSCEPKLDGLAVSLLYRDGQLVQGATRGDGTTGEDISANVRTVRNIPLKLQGKGWPAVL 167
           D   +PK+DG+AV+L+YRDG+L +  +RG+G  GED +  V  +  +P  + G    + L
Sbjct: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL 177

Query: 168 EVRGEVYMSKAGFDRLNAAQAEAGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVG 227
           +  GE+++ + G       Q + GG    N R   AG + + D   T +  L    +   
Sbjct: 178 Q--GEIFLQREGH-----IQQQMGG---INARAKVAGLMMRQDDSDTLN-SLGVFVWAWP 226

Query: 228 QVSESIGDSHIGILEQLKAWGLPISRELKHAAGIEECLAYYRDIGERRNSLPYEIDGVVF 287
              + + D     L++L   G  +++    A    + +A  R+   +   LP+  DGVV 
Sbjct: 227 DGPQLMTDR----LKELATAGFTLTQRYTRAVKNADEVARVRNEWWKA-KLPFVTDGVV- 280

Query: 288 KVNSLAAQRELGFRAREPRWAIAHKFPAMEELTEVLDVEFQVGRTGAVTPVARLKPVKVA 347
            V          +   +  W +A K+  + ++ +V  ++F VG++G ++ VA L PV + 
Sbjct: 281 -VRGAKEPESRHWLPGQAEWLVAWKYQPVAQVAKVKAIQFAVGKSGKISVVASLAPVMLD 339

Query: 348 GVTVSNATLHNMDEIARLGLRIGDTVIIRRAGDVIPQVMQVVLERRPQGARPVEVPSACP 407
              V    + ++       +  GD +++  AG  IP++  VV     +GA          
Sbjct: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW----RGA---------- 385

Query: 408 VCGSQVERTRLVKRSKGKETTSEGAVYRCVGRLA---CGAQLKQAIIHYVSRRAMDIDGL 464
                 ERT        K T  E          A   C  Q    ++   S++ + +DG+
Sbjct: 386 ------ERT--------KPTPPENRFNSLTCYFASDVCQEQFISRLVWLGSKQVLGLDGI 431

Query: 465 GEKSVEQLVDEGLIGSPADLYKLQFEQVVGLEGFAEVSTQKLLDAIEASKRPSLARFIYA 524
           GE     L              L  EQ+    G A+  + +L      +++    R++ A
Sbjct: 432 GEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHRFNLARKQPFTRWVMA 491

Query: 525 LGIP 528
           +GIP
Sbjct: 492 MGIP 495