Pairwise Alignments

Query, 325 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 293 a.a., Cbb3-type cytochrome c oxidase subunit FixP from Xanthobacter sp. DMC5

 Score =  174 bits (440), Expect = 3e-48
 Identities = 107/293 (36%), Positives = 148/293 (50%), Gaps = 38/293 (12%)

Query: 39  TVGHAFDGIEEYDNPLPQWWFWLFVGTIVFALGYLVLYPGLGNWKGVLPGYSYLDNDKQT 98
           T GH +DGI E +NPLP+WW W++   IV+A+GY +LYP         PG          
Sbjct: 19  TTGHEWDGISELNNPLPRWWLWVWYACIVWAIGYWILYPAWPLVSSATPGLL-------- 70

Query: 99  EFSNGQPGWTGVHEWEKEMAKADARFGPIFAKFAAMPIEEVAKDPQALKM----GARLFA 154
                  GW        ++A  +A      AK A   +E++ + P  L +    G   FA
Sbjct: 71  -------GWHSRSAVAVQIADLNAIRSESAAKLANASLEQIEQTPALLSLARAQGRVAFA 123

Query: 155 SNCSVCHGSDAKGAFGFPNLTDNDWRWGGEPETIKTTIMAG--------RHGVMPAWAE- 205
            NC+ CHG+   GA GFPNL D+DW WGG  E I+ TI  G        R G MPA+ + 
Sbjct: 124 DNCAPCHGAGGGGATGFPNLNDDDWLWGGSLEQIQQTIEHGIRANDPDTRQGNMPAFGKD 183

Query: 206 -VIGDQGVADVAAFVVSKLDGRTLPEGAK--ADVENGQKIFAANCVACHGPEGKGTPAMG 262
            ++    ++ VA +V      RTL   AK  AD + G+++FA+NC ACHG +GKG   MG
Sbjct: 184 GILQKPEISAVADYV------RTLSGIAKPGADYDKGKEVFASNCAACHGDDGKGNQEMG 237

Query: 263 APNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAAYVYSL 315
           APNLT    ++YGS  A ++  +  GR   MP+         +  L  YV+SL
Sbjct: 238 APNLT-DGIWLYGSDKATIEYGVINGRGNVMPSWHARLDPTTIKALTVYVHSL 289



 Score = 66.2 bits (160), Expect = 9e-16
 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 139 VAKDPQALKMGARLFASNCSVCHGSDAKG--AFGFPNLTDNDWRWGGEPETIKTTIMAGR 196
           +AK       G  +FASNC+ CHG D KG    G PNLTD  W +G +  TI+  ++ GR
Sbjct: 204 IAKPGADYDKGKEVFASNCAACHGDDGKGNQEMGAPNLTDGIWLYGSDKATIEYGVINGR 263

Query: 197 HGVMPAWAEVIGDQGVADVAAFVVSKLDGR 226
             VMP+W   +    +  +  +V S   GR
Sbjct: 264 GNVMPSWHARLDPTTIKALTVYVHSLGGGR 293