Pairwise Alignments

Query, 325 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 320 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoP (EC 1.9.3.1) from Sphingobium sp. HT1-2

 Score =  165 bits (418), Expect = 1e-45
 Identities = 103/292 (35%), Positives = 144/292 (49%), Gaps = 35/292 (11%)

Query: 39  TVGHAFDGIEEYDNPLPQWWFWLFVGTIVFALGYLVLYPGLGNWKGVLPGYSYLDNDKQT 98
           TVGH +DGIEE D P+P+WW W    TI++ + Y VLYP    W  V             
Sbjct: 14  TVGHEWDGIEELDTPMPRWWLWTLYATIIWGIAYTVLYPA---WPLV------------N 58

Query: 99  EFSNGQPGWTGVHEWEKEMAKADARFGPIFAKFAAMPIEEVAKDPQ----ALKMGARLFA 154
             + G  GW+   +   E      R  P+    A +PIE + +D +    A++ G   F 
Sbjct: 59  SATKGVLGWSSREQLAGEEEAERLRKEPLQLALARIPIERLNEDSRLMQAAVEGGRAAFK 118

Query: 155 SNCSVCHGSDAKGAFGFPNLTDNDWRWGGEPETIKTTIMAG---------RHGVMPAWAE 205
            +C  CHGS A G+ G+PNL D+DW WGG+ + I TT++ G         R   MPA+  
Sbjct: 119 VHCVQCHGSGAAGSKGYPNLNDDDWLWGGDIKQIHTTLVHGIRQPGHAETRMSQMPAFGR 178

Query: 206 --VIGDQGVADVAAFVVSKLDGRTLPEGAKADVENGQKIFAANCVACHGPEGKGTPAMGA 263
             ++  + V D    VVS +   +  E   A  + G K+FA NC  CHG +G+G   +GA
Sbjct: 179 DGILTSEQVED----VVSHVRVISRQEKPSAASQRGAKLFADNCAVCHGAQGQGDRKLGA 234

Query: 264 PNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAAYVYSL 315
           PNL     +++G     L QT+   R G MPA         V +LAAYV+SL
Sbjct: 235 PNLA-DSIWLFGGDREALAQTVNNSRYGVMPAWGARLDPVTVKMLAAYVHSL 285