Pairwise Alignments

Query, 325 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 286 a.a., cytochrome-c oxidase, cbb3-type subunit III from Magnetospirillum magneticum AMB-1

 Score =  144 bits (362), Expect = 3e-39
 Identities = 90/291 (30%), Positives = 139/291 (47%), Gaps = 36/291 (12%)

Query: 39  TVGHAFDGIEEYDNPLPQWWFWLFVGTIVFALGYLVLYPGLGNWKGVLPGYSYLDNDKQT 98
           T GH +DGI+E + PLP+WW ++F  T+++A+GY V YP    W  ++ GY         
Sbjct: 14  TTGHEWDGIKELNTPLPKWWVYVFWATVLWAIGYWVAYPA---WP-LVNGY--------- 60

Query: 99  EFSNGQPGWTGVHEWEKEMAKADARFGPIFAKFAAMPIEEVAKDPQALKM----GARLFA 154
             + G  G++   E + E+A          +K  A  +  + KD   L+     G   F 
Sbjct: 61  --TKGTLGYSSRGELDNELAAQKKSRSAWLSKIEASDVAAIEKDKDLLRYAMAGGKIAFN 118

Query: 155 SNCSVCHGSDAKGAFGFPNLTDNDWRWGGEPETIKTTIMAG--------RHGVMPAWA-- 204
            NC  CHG    GA+G+P L D++W WGG    I+ TI  G        R   MP +   
Sbjct: 119 ENCGACHGVGGVGAYGYPTLADDEWLWGGTLADIEQTIKFGVRNTNANSRQSEMPKFGVD 178

Query: 205 EVIGDQGVADVAAFVVSKLDGRTLPEGAKADVENGQKIFAANCVACHGPEGKGTPAMGAP 264
            V+  + +A V+ +VVS      L   A A    G+ ++A NC  CH  +G G  A+GAP
Sbjct: 179 GVLKPEQIAAVSDYVVS------LASKAPAKGSAGETVYAENCAVCHAEDGSGMAAVGAP 232

Query: 265 NLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAAYVYSL 315
            L + Q ++Y  +   +   +   + G MPA  +      + +LA YV++L
Sbjct: 233 ALNN-QIWLYKGTKDAIVAQVNKPKHGSMPAWSERLDASTIKMLAVYVHNL 282