Pairwise Alignments

Query, 480 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 475 a.a., cbb3-type cytochrome c oxidase subunit I from Pseudomonas simiae WCS417

 Score =  822 bits (2124), Expect = 0.0
 Identities = 379/474 (79%), Positives = 427/474 (90%)

Query: 1   MSTAISPTAYNYKVVRQFAIMTVVWGILGMGLGVFIASQLVWPQLNLDLPWTSFGRLRPL 60
           MSTA    AYNYKVVRQF I T+VWG++GM +GV+IASQLVWP++NLDLPWT+FGRLRPL
Sbjct: 1   MSTATIGQAYNYKVVRQFVIATIVWGVVGMAMGVWIASQLVWPEMNLDLPWTTFGRLRPL 60

Query: 61  HTNLVIFAFGGCALFGTSYYVVQRTCQTRLISDSMAAFTFWGWQAVIVGALITLPMGYTT 120
           HT+LVIF F G A F  SYY VQRTCQ RL SD +AAFTFWGWQ+VIV  LI+LP+GYTT
Sbjct: 61  HTSLVIFGFAGSAQFAASYYAVQRTCQVRLFSDRLAAFTFWGWQSVIVIMLISLPLGYTT 120

Query: 121 TKEYAELEWPLAILLAIVWVTYGLVFFGTIVKRKTKHIYVGNWFYGAFIVVTAMLHIVNH 180
           TKEYAE+E+  A+ +A+VWV Y +VFF T+V+RKT+HIYVGNWF+GAFI+V AMLH+VNH
Sbjct: 121 TKEYAEIEFSGAVWMAVVWVAYAIVFFTTVVRRKTRHIYVGNWFFGAFILVIAMLHVVNH 180

Query: 181 ISLPVSLFKSYSAYSGATDAMIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRL 240
           +++PV  FKSY  YSGATDAM+QWWYGHNAVGFFLTTGFLGMMYYFVPKQ  RP+YSYRL
Sbjct: 181 LAIPVDWFKSYPVYSGATDAMVQWWYGHNAVGFFLTTGFLGMMYYFVPKQVGRPVYSYRL 240

Query: 241 SIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMVMSIILLAPSWGGMINGMMTLSGAWH 300
           SIVHFWALITLYIWAGPHHLHYTALPDWAQSLGM MS+ILLAPSWGGMINGMMTLSGAWH
Sbjct: 241 SIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMAMSLILLAPSWGGMINGMMTLSGAWH 300

Query: 301 KLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISI 360
           KLRTDPILRFLV+SLAFYGMSTFEGPMMAIKTVN+LSHYTDWTIGHVHAGALGWVAMI+ 
Sbjct: 301 KLRTDPILRFLVLSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMITF 360

Query: 361 GAVYHMIPKLYGREQMHSIGLINAHFWLATIGTVLYIASMWVNGITQGLMWRAINDDGTL 420
           G++YHMIPK++GREQMHS+ LIN HFWLATIGTVLYIASMWVNGITQGLMWRA+NDDGTL
Sbjct: 361 GSLYHMIPKVFGREQMHSVSLINLHFWLATIGTVLYIASMWVNGITQGLMWRAVNDDGTL 420

Query: 421 TYSFVEALQASHPGYIVRALGGAFFASGMLLMAYNVFRTVRAANPAQAEEAAKI 474
           TYSFVEALQASHPG++VR  GG FF +GM+LMAYN +RTVR A+   A+  A+I
Sbjct: 421 TYSFVEALQASHPGFVVRFAGGVFFLTGMVLMAYNTWRTVRVADVNMAQLDARI 474