Pairwise Alignments

Query, 313 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 325 a.a., cytochrome Cbb3 from Pseudomonas simiae WCS417

 Score =  522 bits (1344), Expect = e-153
 Identities = 242/323 (74%), Positives = 277/323 (85%), Gaps = 15/323 (4%)

Query: 1   MTTFWSTYISVLTIGSLIGLTWLLLATRKGQSNNTTDETMGHSFDGIEEYDNPLPKWWFW 60
           MTTFWS Y++VL++G++  LTWLLL+TRKGQ    TDET+GHSFDGIEEYDNPLPKWWF 
Sbjct: 1   MTTFWSLYVTVLSLGTIFALTWLLLSTRKGQRAEQTDETVGHSFDGIEEYDNPLPKWWFM 60

Query: 61  LFVGTLAFSVGYLILYPGLGNWKGILPGY--------------ENGWTGANEWQKEMDKA 106
           LFVGT+ F++GYL LYPGLGNWKG+LPGY              + GWTG +EW+KEM K+
Sbjct: 61  LFVGTIIFALGYLALYPGLGNWKGLLPGYSYLDNDKQTPFANGQTGWTGVHEWEKEMAKS 120

Query: 107 DARFGPIFAKYAAMPVEEVAKDPQALKMGSRLFASNCSVCHGSDAKGAFGFPNLTDNDWR 166
           DA+FGPIFAK+A+MP+EEVAKDPQALKMG RLFASNCSVCHGSDAKGA+GFPNLTD DWR
Sbjct: 121 DAKFGPIFAKFASMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWR 180

Query: 167 WGGDPETIKTSIMSGRHGVMPAWAEVIGDQGVADVAAFVVSKLDGRTLPEGAKADVENGQ 226
           WGG+P TIK +IM GRH VMPAW +++ +QGV+DVAAFVV+ LDGR LPEG KADV NG+
Sbjct: 181 WGGEPATIKETIMKGRHAVMPAWLDILKEQGVSDVAAFVVTNLDGRKLPEGVKADVANGE 240

Query: 227 KIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQAEIQ 286
           K+FAANCVACHGP GKGTPAMGAP+LTHP AFIYGSSFAQLQQTIR+GRQGQMPAQ ++Q
Sbjct: 241 KLFAANCVACHGPAGKGTPAMGAPDLTHPGAFIYGSSFAQLQQTIRWGRQGQMPAQEQLQ 300

Query: 287 GNDKVHLLAAYVYSLSQ-DGSAE 308
           GNDKVHLLAAYVYSLS  D  AE
Sbjct: 301 GNDKVHLLAAYVYSLSHGDKKAE 323