Pairwise Alignments

Query, 313 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 315 a.a., cytochrome Cbb3 from Pseudomonas simiae WCS417

 Score =  476 bits (1225), Expect = e-139
 Identities = 218/304 (71%), Positives = 253/304 (83%)

Query: 1   MTTFWSTYISVLTIGSLIGLTWLLLATRKGQSNNTTDETMGHSFDGIEEYDNPLPKWWFW 60
           MT FWST+I VLT+GSLIGLTWLL+ TRKG++  + D+TMGH+FDGIEEYDNPLP+WWF 
Sbjct: 1   MTLFWSTWICVLTLGSLIGLTWLLVGTRKGETKGSVDQTMGHAFDGIEEYDNPLPQWWFM 60

Query: 61  LFVGTLAFSVGYLILYPGLGNWKGILPGYENGWTGANEWQKEMDKADARFGPIFAKYAAM 120
           LF GTL F+VGYLILYPGLGNWKG+LPGY++GWT   EW KEM KADA+FGPIFAK++AM
Sbjct: 61  LFAGTLVFAVGYLILYPGLGNWKGVLPGYQDGWTQTKEWDKEMVKADAKFGPIFAKFSAM 120

Query: 121 PVEEVAKDPQALKMGSRLFASNCSVCHGSDAKGAFGFPNLTDNDWRWGGDPETIKTSIMS 180
           PVEEVAKDPQALKMG RLFASNC+VCHGSDAKGAFGFPNL DN WRWGG  E IKT+I++
Sbjct: 121 PVEEVAKDPQALKMGGRLFASNCAVCHGSDAKGAFGFPNLADNIWRWGGSAEAIKTTILN 180

Query: 181 GRHGVMPAWAEVIGDQGVADVAAFVVSKLDGRTLPEGAKADVENGQKIFAANCVACHGPE 240
           GRH  MPAW +++GD+GV +VAA+V   +    LP  + AD+  GQ  F   CVACHGPE
Sbjct: 181 GRHAAMPAWGDMLGDEGVKNVAAYVRHDVAKLPLPADSTADLAAGQTAFNTTCVACHGPE 240

Query: 241 GKGTPAMGAPNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQAEIQGNDKVHLLAAYVYS 300
           G G  AMGAP+LT P  +IYG+S AQLQQTIR+GRQGQMPAQ  +QGNDKVHLLAAYVYS
Sbjct: 241 GHGMEAMGAPDLTKPAGYIYGTSLAQLQQTIRHGRQGQMPAQEVLQGNDKVHLLAAYVYS 300

Query: 301 LSQD 304
           LS +
Sbjct: 301 LSHN 304