Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 550 a.a., Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  242 bits (617), Expect = 3e-68
 Identities = 148/460 (32%), Positives = 230/460 (50%), Gaps = 36/460 (7%)

Query: 1   MNTTSSTAYNYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPSLNFDLPWTSFGRLRPLH 60
           +   +STA+    V  F      W ++G   G+  + +L  P       W +FGRLR +H
Sbjct: 86  LEADTSTAFP---VFMFIAFACAWLLLGSVAGLVSSIKLHEPDWLVSEAWMTFGRLRSVH 142

Query: 61  TNAVIFAFGGCALFATSYYSVQRTCQTTLFAPGLAAFTFWGWQLV---ILLAAISLPLGY 117
            NAV++ +   A      + + R  +T L       +   G  L+   I     ++ +G+
Sbjct: 143 LNAVLYGWITNAALGMILWLLPRLLRTRLLG---GIWAMLGGALINTGIAGGVGAIAVGW 199

Query: 118 TSSKEYAELEWPIDILITIVWVGYAIVFFG---TLMKRNTKHIYVGNWFFGAFILTVALL 174
           T   EY E+ W I I I   ++G+A+V      TL+ R  +H+YV  W+  A +L +ALL
Sbjct: 200 TDGMEYLEIPWQIGIFI---FLGFALVILPVLFTLVNRKVEHMYVSVWYMVAALLWIALL 256

Query: 175 HIVNNLELPVSLTKSYSVYAGATDAMVQWWYGHNAVGFFLTAGFLGMMYYYVPKQAERPV 234
           ++V  +           V+ G   A   WWYGHN +G + T   +G +YY++PK   RPV
Sbjct: 257 YLVGKMP---------GVHTGVQQATTNWWYGHNVLGLWFTPVSVGAIYYFLPKIIGRPV 307

Query: 235 YSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTL 294
            SY +SI+ FW L   Y   G HHL    +P W  +L +V S++++ P     IN  +T+
Sbjct: 308 RSYNVSILGFWTLAFFYGQVGGHHLVGGPVPGWLVTLSIVQSMMMIIPVIAFTINMALTM 367

Query: 295 SGAWHKLRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWV 354
            G  H  R  P LRF++     Y +S+ +G   A+++VN ++H+T +T+ H H GA  +V
Sbjct: 368 QGRMHLARYSPTLRFMMFGGLMYMLSSLQGSFEALRSVNQITHFTHFTVAHAHLGAYAFV 427

Query: 355 AMISIGALYHTIPKVFGKERMYSLGLINAHFWLATIGTVLYIASMWVNGIAQGLMW---- 410
            M+  GA+Y  +P+V   E  Y   LI+ HFWLA IG  +Y   + + G  QGL      
Sbjct: 428 TMVLFGAIYFMMPRVLNWEWPYP-RLISLHFWLAAIGASIYFVGLSIGGWLQGLAMLDAA 486

Query: 411 RAVNSDGTLTYSFVE-------TLVASHPGFVVRFVGGAI 443
           R      TLTY +++        +VASH  FV  F+  A+
Sbjct: 487 RPFMDSVTLTYPYLKWRSVGGALMVASHVVFVGHFLAMAL 526