Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 547 a.a., Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  242 bits (617), Expect = 3e-68
 Identities = 141/440 (32%), Positives = 218/440 (49%), Gaps = 28/440 (6%)

Query: 14  VRQFAIMTVVWGIVGMGLGVFIAAQLAWPSLNFDLPWTSFGRLRPLHTNAVIFAFGGCAL 73
           V  F     +W +VG   G+  + +L  P       W +FGR+R +H NAVI+ +   A 
Sbjct: 95  VFMFIAFACLWLLVGSVAGLIASYKLHEPDWLVQQAWLTFGRIRTVHLNAVIYGWSSNAA 154

Query: 74  FATSYYSVQRTCQTTLFAPGLAAFTFWGWQLV---ILLAAISLPLGYTSSKEYAELEWPI 130
            A   + + R  +T L       +   G  L+   I     ++ +G++   E+ E+ W I
Sbjct: 155 LAVILWLLPRMLRTPLHG---GIWAMMGGSLINTGIAAGIGAIAVGWSDGMEFLEIPWQI 211

Query: 131 DILITIVWVGYAIVFFG---TLMKRNTKHIYVGNWFFGAFILTVALLHIVNNLELPVSLT 187
           DI I   + G+A+       TL+ R  +H+YV  W+F A +L +A+L +V NL       
Sbjct: 212 DIFI---FAGFALTILPALYTLVNRRVEHLYVSVWYFTAALLWIAVLFLVANLP------ 262

Query: 188 KSYSVYAGATDAMVQWWYGHNAVGFFLTAGFLGMMYYYVPKQAERPVYSYRLSIVHFWAL 247
               V+ G   A   WWYGHNA+G + T   +G +YY++PK   RPV SY LS++ FW L
Sbjct: 263 ---GVHTGVQQATTNWWYGHNALGLWFTPVAVGAIYYFLPKIIGRPVVSYNLSLLGFWTL 319

Query: 248 ITLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDPIL 307
              Y   G HHL    +P W  +L +V S++++ P     IN   TL G  H  R  P L
Sbjct: 320 AFFYGQVGGHHLIGGPIPGWLTTLSIVQSVMMIIPVLAFTINMKGTLKGQMHLARYSPTL 379

Query: 308 RFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGALYHTIP 367
           RF++     Y  S+ +G + A++ +NA++H+T +T+ H H G   +V M+  GA+Y  +P
Sbjct: 380 RFMMFGGLMYFASSVQGSLEALRNINAVTHFTHFTVAHAHLGMYAFVTMVFFGAIYFMMP 439

Query: 368 KVFGKERMYSLGLINAHFWLATIGTVLYIASMWVNGIAQGLMWRAVNSDGTLTYSFVETL 427
           +V   E  Y   LI  HFWLA +G  +Y+  + + G  QG+              F E++
Sbjct: 440 RVLEWEWPYP-WLITLHFWLAALGIGIYVVGLTIGGWLQGVAML------DAARPFGESV 492

Query: 428 VASHPGFVVRFVGGAIFLSG 447
             + P    R VGG +   G
Sbjct: 493 AVTLPWLKSRTVGGLVMTLG 512