Pairwise Alignments

Query, 176 a.a., alternative sigma factor from Pseudomonas putida KT2440

Subject, 170 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

 Score = 58.2 bits (139), Expect = 8e-14
 Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 3/156 (1%)

Query: 12  SPLLQAFVDNRSILVKIAARITGCRSRAEDVVQDAFFRLSTAPQITSSFKAQLSYLFQIV 71
           +P+   + ++R  L     R  G    A D+ QD F R+ +  Q   + +   +YL  + 
Sbjct: 8   APIDALYREHRDWLQGWLRRRLGDGHTAADLTQDTFVRVISGGQ-AQAIQEPRAYLTTLA 66

Query: 72  RNLAIDHYRKQAMELKYSGSEEEGMNVVVQNASPEATHINRAALNDIAEALNELPPRTRY 131
           + +  + +R++ +E  +  +       +    SPE   + R A+  I   L+ LPP+ R 
Sbjct: 67  QRVLYNFWRRRELERAWLDALAAQPQELAP--SPETYALVREAVETIDRWLDGLPPKVRE 124

Query: 132 AFEMYRLNGVPQKDIAKELGVSPTLVNFMIRDALVH 167
           AF + RL G+   DIA  +G+S T V   ++ A+VH
Sbjct: 125 AFLLRRLEGLAHADIAVRMGISITSVERYVKQAIVH 160