Pairwise Alignments

Query, 264 a.a., conserved protein of unknown function with Rhs repeat-associated core domain from Pseudomonas putida KT2440

Subject, 1589 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

 Score = 73.6 bits (179), Expect = 3e-17
 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 21   LLGFNGERPDPMTGNFLLGNGLRAFSPGLMRFNSPDSFSPFKRGGLNAYGYCQGDPINWQ 80
            L G NG+R D  T  ++LG+G+RA+ P LM F   D  SPF  GG+N YGY   +P N  
Sbjct: 1279 LPGINGQRLDVATNLYVLGSGVRAYDPRLMIFLQADPLSPFDEGGVNGYGYAACNPTNMM 1338

Query: 81   DPSGHFRFWRRLSSAFSGRA 100
            DPSG +  W  L  AF+G A
Sbjct: 1339 DPSGLWPTW--LKWAFTGAA 1356