Pairwise Alignments

Query, 552 a.a., pyoverdine ABC export system, fused ATPase and permease components from Pseudomonas putida KT2440

Subject, 555 a.a., Lipid A export permease/ATP-binding protein MsbA from Variovorax sp. SCN45

 Score =  111 bits (278), Expect = 6e-29
 Identities = 122/520 (23%), Positives = 223/520 (42%), Gaps = 40/520 (7%)

Query: 51  DTGLTQGVV-LGFAGLCLLALFS-----SICSDMGTNWVGQHIIARLRRELGEKVLAAPI 104
           D G T+G + L F    +L LF+        S    + +    + +LRR + E++L A +
Sbjct: 19  DRGFTRGEMPLWFVPAAVLLLFAVRGIAQFISQYALSRIANEGMQKLRRVMFERLLGAEL 78

Query: 105 DQIERYRSHRLIPVLTHDVDTISDFAFVFAPLAVSLT--VTVGCLGYLAHLSIPMFLVIL 162
               R  +  L   + ++V T      V A L +S      +  LGYL +L+  + L++ 
Sbjct: 79  ALFTRQSASALSNTVVYEVQT-GAMLLVQALLGLSRDGFTLIALLGYLVYLNWKLTLIVA 137

Query: 163 VAIGIGSVMQFVARSWGVRGFESAREAEDELQKHYSAIAEGAKELRIHRPR--RKRMFQH 220
             +   S +  V      R  +  ++A DEL           + +R+H     + R F+ 
Sbjct: 138 FLVPSISWIMKVFSKRLYRLTQQGQQATDELAYVVEENVLAHRVVRLHGAEGAQGRRFEQ 197

Query: 221 GIQDTANRICATQVRSINTFVIAKTLGSMLFFVVIAVALAMQSLWPTGDKSVTSG----F 276
             Q        + +    T  + + + S+   VV+ +AL     W +G +  T G    +
Sbjct: 198 LSQRLNRLAVKSTIAQAATTPLTQMMASLALSVVVMIAL-----WQSGKQGFTVGGFVAY 252

Query: 277 VLVLLYMKGPLEHLISTLPIISKAQIAFRRIAELSRQFSSPEPHLLLDDTRAADKALHTL 336
           +  +L +  P+  L      I++   A  R   L  + + PE       T   + A   +
Sbjct: 253 ITAMLMLIAPIRRLAEVAGPITRGLAALERGLVLIDEVA-PESQ----GTFRIEHAEGRI 307

Query: 337 QLQDVSYTFPRVEGSEPFHLGPVNLSIKQGDIVFIVGENGCGKTTLIKLLLGLYAPQQGT 396
           +L++V  ++   +  E   L  VNL+I+ G +V  VG +G GKTTL+ LL     P  G 
Sbjct: 308 ELRNVQVSYRGDD--EQRALDGVNLTIEPGQVVAFVGPSGSGKTTLVNLLPRFVQPSSGQ 365

Query: 397 ISLDGKPVTAENRDDYRQLFTTIFADYYLFDDVIQGDRPVPA--DASRYLERLEIA---- 450
           + LDG   +       R  F  +  D  + ++ +  +  + +  D  R L+ ++ A    
Sbjct: 366 VLLDGHDTSEWELKSLRAQFAMVSQDVVMLNETLAANVALGSEIDRERVLQCIDAANLSS 425

Query: 451 HKVSIRDGV-----FSTTDLSTGQRKRLALVSAWLEERPVLVFDEWAADQDPTFRRIFYT 505
           H  ++  G+      + T LS GQR+RLA+  A  +  PVL+ DE  +  D    R+   
Sbjct: 426 HVENLPQGIDTVLGHNATQLSGGQRQRLAIARALYKNAPVLLLDEATSALDTESERLVQD 485

Query: 506 ELLPDLKRLGKTIIVISHDDRYFDVADQLIHMAAGKVQQE 545
            L   ++   +T ++++H       AD++I M  G++ ++
Sbjct: 486 ALQRLMQ--NRTTLIVAHRLSTIQHADRIIVMEQGRIAEQ 523