Pairwise Alignments

Query, 552 a.a., pyoverdine ABC export system, fused ATPase and permease components from Pseudomonas putida KT2440

Subject, 587 a.a., putative ABC efflux transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  110 bits (275), Expect = 2e-28
 Identities = 131/534 (24%), Positives = 237/534 (44%), Gaps = 59/534 (11%)

Query: 22  LVTVSIILGMVGGLSVTALLATINSALHSDTGLTQGVVLGFAGLCLLALFSSICSDMGTN 81
           +VT +I L M  G+ +      +  + H    L Q + L F  L L     +       +
Sbjct: 35  VVTAAITLSMGQGIRLLVDQGFMTRSAHQ---LNQTIGL-FLLLVLALAVGTFSRFYLVS 90

Query: 82  WVGQHIIARLRRELGEKVLAAPIDQIERYRSHRLIPVLTHDVDTISDFAFVFAPLAVSLT 141
           W+G+  +A +RR + + ++       E  RS  +   LT D   +   + + + L++ L 
Sbjct: 91  WIGERCVADIRRAVFDHLIGLHPGFFEDNRSSEIQSRLTADTTLLQ--SVIGSSLSMFLR 148

Query: 142 VTVGCLG-----YLAHLSIPMFLVILVAIGIGSVMQFVARSWGVRGFESAREAEDELQKH 196
             +  +G     ++ +  +   +V+ + + +  ++ F     G R    +R+++D +   
Sbjct: 149 NALMVIGGVVLLFITNPKLTSIVVVTLPLVLAPILLF-----GRRVRSLSRQSQDRVADV 203

Query: 197 YSAIAEGAKELRI-----HRPRRKRMFQHGIQD--TANRICATQVRSINTFVIAKTLGSM 249
            S +AE   +++      H+   + +F   ++   T  R   TQ   + T VI   LG++
Sbjct: 204 GSYVAETLGQIKTVQAYNHQAHDRELFADTVEAAFTVARKRITQRAWLITLVIVLVLGAV 263

Query: 250 LFFVVIAVALAMQSLWPTGDKSVTSGFVLVLLYMKGPLEHLISTLPIISKAQIAFRRIAE 309
              + +     +      G+ +    + L++    G L  +I  L    +A  A  RIAE
Sbjct: 264 GVMLWVGGMDVIAGRISAGELAAFVFYSLIVGSAFGTLSEVIGEL---QRAAGAAERIAE 320

Query: 310 LSRQFSS---PEPHLLLDDTRAADKALHTLQLQDVSYTFPRVEGSEPF--HLGPVNLSIK 364
           L    S+   P+   +L   RA+      ++LQ V + +P    S P    +  ++L+I+
Sbjct: 321 LLAARSAILPPDVAQVLPQPRASGH----IELQQVVFAYP----SRPTVAAVDGLSLTIE 372

Query: 365 QGDIVFIVGENGCGKTTLIKLLLGLYAPQQGTISLDGKPVTAENRDDYRQLFTTIFADYY 424
            G  V +VG +G GK+TL  LLL  Y PQQG I LDG+PVT  + D  R+ F  +  +  
Sbjct: 373 PGQTVALVGPSGAGKSTLFDLLLRFYDPQQGRILLDGQPVTDFDPDQLRRQFALVAQNPS 432

Query: 425 LFDDVIQGD----RPVP-----------ADASRYLERLEIAHKVSIRDGVFSTTDLSTGQ 469
           LF   ++ +    RP             A A  ++ +L   ++  + +G      LS GQ
Sbjct: 433 LFRGTVEANIRYGRPEATLAEVEAAARGAHADEFIRQLPQGYQTPLGEGGIG---LSGGQ 489

Query: 470 RKRLALVSAWLEERPVLVFDEWAADQDPTFRRIFYTELLPDLKRLGKTIIVISH 523
           R+RLA+  A L + P+L+ DE  +  D     +   + LP L   G+T +VI+H
Sbjct: 490 RQRLAIARALLVDAPILLLDEATSALDAQSEYLI-QQALPSL-MAGRTTLVIAH 541