Pairwise Alignments

Query, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 416 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 21/206 (10%)

Query: 36  PVSTVAVTRADIESSVTALGTLQPRRYVDVGAQASGQIRNLHVEVGDQVHKGQLLVEIDP 95
           PV+ V V + ++   +TALGT+Q    V V  Q  GQ+ +LH   G  V KGQLL +IDP
Sbjct: 56  PVTVVPVVKQNVPVYLTALGTVQALNTVTVNPQVGGQLLSLHFSEGQPVKKGQLLAQIDP 115

Query: 96  STQQAKLDAGRFSIDNLKAQLAEQRAQLKLAQQQLKRQRDLAAVGATREEDLQTAEAQLN 155
              QA       + D   A+  + +A    A+  L R RDLAA G   ++DL T    L 
Sbjct: 116 RIYQA-------AYDQAVARQRQDQALAATAKSNLTRSRDLAAKGYISKQDLDT----LR 164

Query: 156 VTQARIDMYQAQIRQANASLRSDEAELGYTRIFAPMDGT--VVAVDAREGQTLNAQQQTP 213
            T A+   Y+A +    A++R  + +L YTR+ +P+D    + AVD       N    + 
Sbjct: 165 NTAAQ---YEAAVAADAANVRDTQVQLNYTRVLSPIDSLAGIRAVDPG-----NVVTTSS 216

Query: 214 LILRIAKLSPMTVWAQVSEADIGKIQ 239
            I+ + +L P+ V   + E ++  ++
Sbjct: 217 AIVTLTQLHPINVMFTLPEQNLDMVR 242