Pairwise Alignments

Query, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 438 a.a., Efflux pump periplasmic linker BepF from Xanthobacter sp. DMC5

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 100/363 (27%), Positives = 154/363 (42%), Gaps = 33/363 (9%)

Query: 28  TSLPFGAQPVSTVAVTRADIESSVTALGTLQPRRYVDVGAQASGQIRNLHVEVGDQVHKG 87
           T +P     V+   V    I   +   G       VD+ A+  G + N++ + G    KG
Sbjct: 32  TYVPPPPPKVTVATVLEQPITRFLELTGNTAAINSVDLNARVQGFLTNINYKDGAFAKKG 91

Query: 88  QLLVEIDPSTQQAKLDAGRFSIDNLKAQLAEQRAQLKLAQQQLKRQRDLAAVGATREEDL 147
             L  I+  T  A+       +D  KA LA  +A    A+ +  RQ  LA      ++D 
Sbjct: 92  TTLFVIEQDTYIAQ-------VDQAKATLAANQASQVQAEAEFNRQNQLA------KQDF 138

Query: 148 QTAEAQLNVTQARIDMYQAQIRQANASLRSDEAELGYTRIFAPMDGTVVAVDAREGQTLN 207
             ++A L+  +A+ D   AQ+  A ASL+  +  LGYT++ AP DG V A     G  + 
Sbjct: 139 -ASQAALDQARAKRDSAVAQVANAEASLQLAQINLGYTQVNAPFDGAVTAHLQDVGALVG 197

Query: 208 AQQQTPLILRIAKLSPMTVWAQVSEADIGKIQPGMTAYFTTLAGGKRRWTSTVRQVLPIP 267
               T L   I +L+P+ VW  +SE ++ +I+         LA   R  TS  R +  IP
Sbjct: 198 YSGPTKL-ATIVQLNPIWVWFTLSEQEVLRIK-------EQLAKQGRSLTSLTRDLPDIP 249

Query: 268 PKPLDQTSQGGGSPASATAGATGSQVVQYTVLLDV----DNPDGALMAEMTTQVFFVVGQ 323
            +   QT    G P +        QV      L V     N D  L+  +  +V   +GQ
Sbjct: 250 IEIGLQTET--GYPHAGRIDYIAPQVDPNLGTLTVRGIFQNDDFVLLPGLFARVRVPLGQ 307

Query: 324 ASQVLSAPLAALDDSDNEGLRLAQVFGRDGKVEQRKVRTG--LSDRLRVQILDGLSEGDR 381
            +  +  P +A+  S N+          D  V Q ++  G   +D LR  +L GL   DR
Sbjct: 308 PAPTILVPDSAV--SYNQLGPYVLTVSSDNVVGQTQITLGQLQADGLRA-VLSGLKTTDR 364

Query: 382 LVI 384
           ++I
Sbjct: 365 VII 367