Pairwise Alignments

Query, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 363 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  100 bits (249), Expect = 7e-26
 Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 17/211 (8%)

Query: 55  GTLQPRRYVDVGAQASGQIRNLHVEVGDQVHKGQLLVEIDPSTQQAKLDAGRFSIDNLKA 114
           GT+QPR    +  QA+G++ + +VEVGD+V  GQ+L  +DP        A  F++ + +A
Sbjct: 52  GTVQPRVTSALSFQATGRVVSRYVEVGDEVKAGQVLARLDPL-------ALAFAVQSAQA 104

Query: 115 QLAEQRAQLKLAQQQLKRQRDLAAVGATREEDLQTAEAQLNVTQARIDMYQAQIRQANAS 174
            + + +A+L+ A    KRQR LAAV  T  E L+ AE  L   QA +D+ QA+ R+A+  
Sbjct: 105 SVQDAQAKLQNAVITAKRQRSLAAVNVTSVESLEEAEQSLTAAQAAVDVAQARRRKAS-- 162

Query: 175 LRSDEAELGYTRIFAPMDGTVVAVDAREGQTLNAQQQTPLILRIAKLSPMTVWAQVSEAD 234
                 +L Y  + A  DG + +V    GQT+ A Q    +L+IA L        + E+ 
Sbjct: 163 -----EQLNYAELKAHFDGVITSVSVETGQTVAAGQ---AVLQIAYLGERDAVVDLPESQ 214

Query: 235 IGKIQPGMTAYFTTLAGGKRRWTSTVRQVLP 265
           +  +  G             +WT  +R++ P
Sbjct: 215 LKDVTLGHRFEVALQMDPAVKWTGELREIAP 245