Pairwise Alignments

Query, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 368 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 91/356 (25%), Positives = 151/356 (42%), Gaps = 48/356 (13%)

Query: 37  VSTVAVTRADIESSVTALGTLQPRRYVDVGAQASGQIRNLHVEVGDQVHKGQLLVEIDPS 96
           V   +VT   +       GT+ P   +++  Q SG I  + VE G +V KGQ L EID S
Sbjct: 37  VHATSVTSKHVTGLDLYPGTVVPLNEIEIRPQVSGYINKIFVEDGQEVAKGQKLYEIDRS 96

Query: 97  TQQAKLDAGRFSIDNLKAQLAEQRAQLKLAQQQLKR-QRDLAAVGATREEDLQTAEAQLN 155
             QA  +              + +A LK A+  L+R ++DLA   A  +++   A+ QL+
Sbjct: 97  KYQAAYE--------------QAQATLKSAKANLERVKKDLARYEALDKQE-AIAKQQLD 141

Query: 156 VTQARIDMYQAQIRQANASLRSDEAELGYTRIFAPMDGTVVAVDAREGQTLNAQQQTPLI 215
             +A I   ++Q+  A A +RS   +  Y+ I AP  GTV     R G  ++A Q   L+
Sbjct: 142 YAKADILTAESQVSSAEAQVRSTLTDYNYSVITAPFSGTVGISQVRLGAQVSAGQS--LL 199

Query: 216 LRIAKLSPMTVWAQVSEADIGKIQPGMTAYFTTLAGGKRRWTSTVRQVLPIPPKPLDQTS 275
             ++   P+ V   V+E D+                  RR++  ++    +P      T 
Sbjct: 200 NTLSSNDPVLVDFVVNERDV------------------RRFSKMMKNE-SLPDSTF--TI 238

Query: 276 QGGGSPASATAG-------ATGSQVVQYTVLLDVDNPDGALMAEMTTQVFFVVGQASQVL 328
           Q G +      G       A G Q     + ++  NPD  L+  MT  +  +       +
Sbjct: 239 QFGENDVYRHHGELTTIDRAVGRQSGTINMRVEFPNPDRELIPGMTLNLRVLNQDIGDQI 298

Query: 329 SAPLAALDDSDNEGLRLAQVFGRDGKVEQRKVRTGLSDRLRVQILDGLSEGDRLVI 384
           + P  A+  ++  G     V G D  V Q+ V+ G      + + +GL  G ++V+
Sbjct: 299 AIPFKAV--TEQMGEYFVYVVGDDSVVHQQNVQLGTKVGAEIVVREGLKPGQKIVV 352