Pairwise Alignments

Query, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 428 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  114 bits (286), Expect = 4e-30
 Identities = 109/416 (26%), Positives = 176/416 (42%), Gaps = 60/416 (14%)

Query: 12  LLGGLG-----LLGLGSLLAWTSLPFGAQPVSTVAVTRADIESSVTALGTLQPRRYVDVG 66
           +LGG+       + +G  L W       + V T   ++  I   V+A G ++P   V + 
Sbjct: 12  ILGGVAGVLILFIIIGRALGWVGGAAETE-VETTKASKKTIVEKVSASGVIEPETEVKLS 70

Query: 67  AQASGQIRNLHVEVGDQVHKGQLLVEIDPSTQQAKLDAGRFSIDNLKAQLAEQRAQLK-- 124
              +G+I  L++  GD V +  LLV+I P    + LD  R +++  KA LA+ +A LK  
Sbjct: 71  PDVAGEIIELNISEGDSVKQNDLLVKIRPDNFISALDRTRANLNQQKANLAQSQAALKRS 130

Query: 125 -----LAQQQLKRQRDLAAVGATREEDLQ-------TAEAQLNVTQARIDMYQAQIRQAN 172
                 A+ Q +R + L       + + +       +AE  L   Q  ++  +  ++ + 
Sbjct: 131 EALFDRAKLQYERNKSLYESNVISDSEFEQATADYVSAENDLKAAQQSVEAAEYVVKSSQ 190

Query: 173 ASLRSDEAELGYTRIFAPMDGTVVAVDAREGQTLNAQQQT--PLILRIAKLSPMTVWAQV 230
           AS+      L  T +FAP DG V  +   +G+ +   QQ     +LRIA LS M V   V
Sbjct: 191 ASVEEANENLRLTNVFAPTDGIVSKLLVEKGERVVGTQQMAGTEMLRIADLSVMEVVVDV 250

Query: 231 SEADIGKIQPGMTAYFTTLAGGK--RRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGA 288
           +E DI +I  G T      A      ++T  V  +                   SA   A
Sbjct: 251 NENDIVRISLGDTTIIEVDAYSHTGEKFTGVVTSI-----------------ANSANEKA 293

Query: 289 TGSQVVQYTVLLDVDNPDGALMAE----------MTTQVFFVVGQASQVLSAPLAALD-- 336
           T   V ++ V + + N     +            MT  V  +  + + VLS PLAA+   
Sbjct: 294 TQDAVTEFEVEIRILNESYEKLITKENRYPFRPGMTASVEIITEKKADVLSVPLAAVTTR 353

Query: 337 -----DSDNEGLRLAQV--FGRDGKVEQRKVRTGLSDRLRVQILDGLSEGDRLVIG 385
                DS N    L ++       K    +V+TG+SD   ++IL+G+ EG+ LV G
Sbjct: 354 DDIRVDSTNAESDLQEIIFMSEGNKAHLTRVKTGISDFENIEILEGIKEGEELVSG 409