Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 172 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 72.8 bits (177), Expect = 3e-18
 Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 1/146 (0%)

Query: 8   LVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRRQLVR 67
           L+++L   +     AED++ D ++R+L R        PRAFL   A  L+ D  RR  + 
Sbjct: 23  LLAWLRRNVACPSRAEDLSQDTFMRLLGRDELRAPREPRAFLMAIAKGLLFDYFRRAALE 82

Query: 68  QAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGLSHQQI 127
           QA   + +      H S  +  L L+  L  + + L +LS   R +FL  +++G+ H +I
Sbjct: 83  QAYLTELMLIPESEHPSPEEQHLILED-LKAIDRLLGKLSSKARAAFLYNRLDGIGHAEI 141

Query: 128 AERLGISRSLVEKHIVNAMKHCRVRM 153
           A+RLG+S   V +++   ++ C + +
Sbjct: 142 AQRLGVSVPRVRQYLAQGIRQCYIAL 167