Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 173 a.a., RNA polymerase sigma70 from Pseudomonas simiae WCS417

 Score = 84.3 bits (207), Expect = 9e-22
 Identities = 48/152 (31%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 8   LVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRRQLVR 67
           L  +L+ ++   Q A D+  +++LR+ E+   E+I++ + +LYRTA NL++D  R++  R
Sbjct: 17  LRGYLARKVRDPQLAADLVQESFLRLAEKPAGERIDNSQGYLYRTASNLLIDHIRQEARR 76

Query: 68  QAE--PLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGLSHQ 125
           + +  P +AL A+     + L+      Q+   +++AL EL    +  F L +IEG++H 
Sbjct: 77  KTDAVPHEAL-AEIEDEVAGLEAQAMAQQQRQALKQALAELPERTQQIFRLNRIEGMTHA 135

Query: 126 QIAERLGISRSLVEKHIVNAMKHCRVRMRQWE 157
           Q+A  L IS S V+KH+  A+ +   R++  E
Sbjct: 136 QVARHLDISDSSVQKHLAKALAYVMQRLQDGE 167