Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 166 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

 Score =  125 bits (313), Expect = 4e-34
 Identities = 66/150 (44%), Positives = 103/150 (68%), Gaps = 2/150 (1%)

Query: 4   YYRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRR 63
           +Y EL+   + RL +RQ AED+AHD ++RVLE   SE +E PRA+L++TA N+ VD +RR
Sbjct: 14  HYEELIGTWTRRLRNRQQAEDLAHDTFVRVLESKSSE-VEQPRAYLHQTARNIAVDAYRR 72

Query: 64  QLVRQAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGLS 123
           +  R+A  L+A D  S  +S + +H +   Q    +++AL EL   CR  F+ +KIEGL+
Sbjct: 73  EDRREAITLEAFDQRSP-NSGDPEHFMHAIQLADSIERALSELPLNCRKIFIWQKIEGLT 131

Query: 124 HQQIAERLGISRSLVEKHIVNAMKHCRVRM 153
            Q+IAERLG+S+++VEK+++  ++H R R+
Sbjct: 132 QQEIAERLGLSKNMVEKYMIRTLRHLRDRL 161