Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 169 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 77.4 bits (189), Expect = 1e-19
 Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 1/142 (0%)

Query: 8   LVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRRQLVR 67
           L  +L  RLG R+ A DVA D +LR+L        +  R++L + A NLV+D+ RR  + 
Sbjct: 22  LQGWLRRRLGDREHAADVAQDTFLRLLVSGRFPGDKESRSYLAQIARNLVIDQWRRLRIE 81

Query: 68  QAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGLSHQQI 127
           +A  L+++       S  L+    + + L  +   LD +    R +FLL + EGLS+ QI
Sbjct: 82  RAY-LESIAHLPEPESPSLETRALILETLMQIDAMLDRMPDNVRQAFLLSQFEGLSYAQI 140

Query: 128 AERLGISRSLVEKHIVNAMKHC 149
           AERLG++ S V+K++  A+  C
Sbjct: 141 AERLGVTVSSVQKYMTRAIVAC 162