Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 192 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

 Score = 75.9 bits (185), Expect = 3e-19
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 1/149 (0%)

Query: 7   ELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRRQLV 66
           ++ + +S R+G R  A D+  D +LR   R    Q+E    +L R A N+ +D  R +  
Sbjct: 34  QMEALVSRRVGCRATAADLVQDLFLRFWRRP-LVQVEELSTYLLRCAGNIAIDHLRSEGA 92

Query: 67  RQAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGLSHQQ 126
           R       L        SE Q  L+    L  ++ AL  L    R  FLL +I G  + Q
Sbjct: 93  RARSSEGWLPEQQDNQGSEPQAALEAGNDLRHVEAALRSLPERTRQIFLLNRIHGRKYAQ 152

Query: 127 IAERLGISRSLVEKHIVNAMKHCRVRMRQ 155
           IA+ +G+S+S VEKH++ A++ C+  +R+
Sbjct: 153 IAKAMGLSQSAVEKHMMRALEACKASLRE 181