Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 162 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 69.7 bits (169), Expect = 2e-17
 Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 3/147 (2%)

Query: 4   YYRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRR 63
           ++  L  +L  +LG  ++A D+A D ++RVL    +  +  PRAFL   A  ++ + +RR
Sbjct: 14  HHHWLTGWLRRKLGCPESAADLAQDTFMRVLTAREAPTLIEPRAFLTTVAKRVLFNFYRR 73

Query: 64  QLVRQAEPLDAL-DADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGL 122
           Q + +A  LDAL      +  SE +  + L Q L  + + LD L    + +FLL + +GL
Sbjct: 74  QDLERAY-LDALAQMPEHVAPSEEERAIIL-QTLVELDQLLDGLPVQVKRAFLLAQCDGL 131

Query: 123 SHQQIAERLGISRSLVEKHIVNAMKHC 149
           ++ QI   LGIS + V++H+  A   C
Sbjct: 132 TYAQIGAELGISIATVKRHLSKAAMRC 158