Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 170 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

 Score = 75.1 bits (183), Expect = 5e-19
 Identities = 49/148 (33%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 5   YRE----LVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDR 60
           YRE    L  +L  RLG    A D+  D ++RV+    ++ I+ PRA+L   A  ++ + 
Sbjct: 14  YREHRDWLQGWLRRRLGDGHTAADLTQDTFVRVISGGQAQAIQEPRAYLTTLAQRVLYNF 73

Query: 61  HRRQLVRQAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIE 120
            RR+ + +A  LDAL A  +  +   +    + + +  + + LD L    R++FLLR++E
Sbjct: 74  WRRRELERAW-LDALAAQPQELAPSPETYALVREAVETIDRWLDGLPPKVREAFLLRRLE 132

Query: 121 GLSHQQIAERLGISRSLVEKHIVNAMKH 148
           GL+H  IA R+GIS + VE+++  A+ H
Sbjct: 133 GLAHADIAVRMGISITSVERYVKQAIVH 160