Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 169 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 90.9 bits (224), Expect = 9e-24
 Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 1/151 (0%)

Query: 4   YYRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRR 63
           Y   L  + + R+ S    +D+  D  LR+  R   + I++   +++RTA +++ D+ RR
Sbjct: 17  YIPALRRYFARRVASAHIVDDLVQDVMLRMHVRQSPDGIDNLEGYIFRTASSVLRDQARR 76

Query: 64  QLVRQAEPLDAL-DADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGL 122
             VR A+  D L + D           LQ  + +A + +AL+EL    RD FL+R+ EGL
Sbjct: 77  DQVRHAKGHDELTEKDHPAEERTADRVLQAREEIAQVVRALEELPERTRDIFLMRRYEGL 136

Query: 123 SHQQIAERLGISRSLVEKHIVNAMKHCRVRM 153
           ++  IAERLGIS S +EKH+  A+ H   RM
Sbjct: 137 AYGDIAERLGISVSAIEKHVAKAVAHIARRM 167