Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score =  109 bits (273), Expect = 2e-29
 Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 18/155 (11%)

Query: 4   YYRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRR 63
           +Y EL+   + +L SRQ AED+ HDA++RVLE T  EQ+E PRA+L++ A N+ VD  RR
Sbjct: 10  HYHELIGTWTRKLRSRQQAEDLTHDAFVRVLE-TPREQVEQPRAYLHQAARNIAVDGFRR 68

Query: 64  QLVRQAEPLDAL--------DADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFL 115
           +  RQA   +A         D ++ +H+ EL   ++         +AL EL   CR  F+
Sbjct: 69  EDRRQALEREAFEEGATGSGDPEAYVHALELADSVE---------RALAELPLNCRQVFI 119

Query: 116 LRKIEGLSHQQIAERLGISRSLVEKHIVNAMKHCR 150
            +K+EGL+  +IAER+G+S+++VEK+++  ++H R
Sbjct: 120 WQKLEGLTQAEIAERMGLSKNMVEKYMIRTLRHLR 154